Evidence map›Paper›PMID 26653140›Full record

ArticleeLife2015

A gene-expression screen identifies a non-toxic sumoylation inhibitor that mimics SUMO-less human LRH-1 in liver.

Miyuki Suzawa, Diego A Miranda, Karmela A Ramos, Kenny K-H Ang, Emily J Faivre, Christopher G Wilson, Laura Caboni, Michelle R Arkin, Yeong-Sang Kim, Robert J Fletterick and 3 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. Review
  3. Activation and Evasion of the FEAR Pathway by RNA Viruses.bioRxiv : the preprint server for biology · 2025
    Article
  4. Article
  5. Review
  6. Review
  7. Review
  8. Article
  9. Article
  10. Review
  11. The SUMOylation and ubiquitination crosstalk in cancer.Journal of cancer research and clinical oncology · 2023
    Review
  12. Review
  13. Review
  14. Article
  15. Review
  16. Review
  17. Review
  18. Review
  19. A genome-wide screen inmicroPublication biology · 2021
    Article
  20. Current Status of SUMOylation Inhibitors.Current medicinal chemistry · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Miyuki SuzawaDepartment of Cellular and Molecular Pharmacology, University of California, San Francisco, San Francisco, United States.
Diego A MirandaDepartment of Cellular and Molecular Pharmacology, University of California, San Francisco, San Francisco, United States.
Karmela A RamosDepartment of Cellular and Molecular Pharmacology, University of California, San Francisco, San Francisco, United States.
Kenny K-H AngSmall Molecule Discovery Center, Department of Pharmaceutical Chemistry, University of California, San Francisco, San Francisco, United States.
Emily J FaivreDepartment of Cellular and Molecular Pharmacology, University of California, San Francisco, San Francisco, United States.
Christopher G WilsonSmall Molecule Discovery Center, Department of Pharmaceutical Chemistry, University of California, San Francisco, San Francisco, United States.
Laura CaboniDepartment of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, United States.
Michelle R ArkinSmall Molecule Discovery Center, Department of Pharmaceutical Chemistry, University of California, San Francisco, San Francisco, United States.
Yeong-Sang KimChemical Biology Laboratory, National Cancer Institute, Frederick, United States.
Robert J FletterickDepartment of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, United States.
Aaron DiazDepartment of Epidemiology and Biostatistics, University of California, San Francisco, San Francisco, United States.
John S SchneeklothChemical Biology Laboratory, National Cancer Institute, Frederick, United States.
Holly A IngrahamDepartment of Cellular and Molecular Pharmacology, University of California, San Francisco, San Francisco, United States.
University of California, San Francisco · USFrederick National Laboratory for Cancer Research · US

Funding

UCSF Liver Core CenterP30DK026743 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Jennifer Y. Chen · 1986 to 2026
$30.7M
UCSF Nutrition Obesity Research CenterP30DK098722 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CHRISTIAN VAISSE · 2015 to 2026
$14.6M
Identification of Inhibitors of Protein SumoylationZIABC011449 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI SCHNEEKLOTH, JOHN · 2012 to 2019
$4.2M
REPRODUCTIVE ENDOCRINOLOGYT32HD007263 · NICHD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MELLON, SYNTHIA H · 1985 to 2023
$4.1M
Orphan Nuclear Receptors in Development and PhysiologyR01DK063592 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI INGRAHAM, HOLLY A. · 2003 to 2013
$3.5M
Mapping Hypothalamic Neurocircuits Controlling Physical ActivityR01DK099722 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI INGRAHAM, HOLLY A. · 2014 to 2018
$2.0M
American Heart Association-American Stroke Association 14POST20130048Intramural NIH HHSNICHD NIH HHS T32 HD007263NIDDK NIH HHS P30 DK026743NIDDK NIH HHS P30 DK098722NIDDK NIH HHS R01 DK063592NIDDK NIH HHS R01-DK063592-563 S1NIDDK NIH HHS R01 DK099722NIDDK NIH HHS R01-DK099722
6 · The paper itself

Abstract

SUMO-modification of nuclear proteins has profound effects on gene expression. However, non-toxic chemical tools that modulate sumoylation in cells are lacking. Here, to identify small molecule sumoylation inhibitors we developed a cell-based screen that focused on the well-sumoylated substrate, human Liver Receptor Homolog-1 (hLRH-1, NR5A2). Our primary gene-expression screen assayed two SUMO-sensitive transcripts, APOC3 and MUC1, that are upregulated by SUMO-less hLRH-1 or by siUBC9 knockdown, respectively. A polyphenol, tannic acid (TA) emerged as a potent sumoylation inhibitor in vitro (IC50 = 12.8 µM) and in cells. TA also increased hLRH-1 occupancy on SUMO-sensitive transcripts. Most significantly, when tested in humanized mouse primary hepatocytes, TA inhibits hLRH-1 sumoylation and induces SUMO-sensitive genes, thereby recapitulating the effects of expressing SUMO-less hLRH-1 in mouse liver. Our findings underscore the benefits of phenotypic screening for targeting post-translational modifications, and illustrate the potential utility of TA for probing the cellular consequences of sumoylation.

Indexed as

AnimalsCells, CulturedDrug Evaluation, PreclinicalEnzyme InhibitorsGene Expression ProfilingHepatocytesHumansInhibitory Concentration 50MiceMice, SCIDReceptors, Cytoplasmic and NuclearSumoylationTanninsEnzyme InhibitorsNR5A2 protein, humanReceptors, Cytoplasmic and NuclearTanninscell biologyhumanhuman biologymedicinemouseNASHNR5Asphenotypic screenprimary hepatocytessumoylationtannic acid

Identifiers

PMID26653140
PMCPMC4749390
OpenAlexW2195774733

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.