Evidence map›Paper›PMID 26652669›Full record

ArticleNucleus (Austin, Tex.)2015

Rapamycin reduces fibroblast proliferation without causing quiescence and induces STAT5A/B-mediated cytokine production.

Zoe E Gillespie, Kimberly MacKay, Michelle Sander, Brett Trost, Wojciech Dawicki, Aruna Wickramarathna, John Gordon, Mark Eramian, Ian R Kill, Joanna M Bridger and 3 more

Open access · goldAbstract read
In one paragraph

Article in Nucleus (Austin, Tex.), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
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  5. Article
  6. Article
  7. mTOR Activity and Autophagy in Senescent Cells, a Complex Partnership.International journal of molecular sciences · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Zoe E Gillespiea Department of Food and Bioproduct Sciences ; University of Saskatchewan ; Saskatoon , Canada.
Kimberly MacKayc Department of Computer Science ; University of Saskatchewan ; Saskatoon , Canada.
Michelle Sandera Department of Food and Bioproduct Sciences ; University of Saskatchewan ; Saskatoon , Canada.
Brett Trostc Department of Computer Science ; University of Saskatchewan ; Saskatoon , Canada.
Wojciech Dawickid Department of Medicine ; Division of Respirology, Critical Care and Sleep Medicine; Royal University Hospital ; Saskatoon , Canada.
Aruna Wickramarathnaa Department of Food and Bioproduct Sciences ; University of Saskatchewan ; Saskatoon , Canada.
John Gordond Department of Medicine ; Division of Respirology, Critical Care and Sleep Medicine; Royal University Hospital ; Saskatoon , Canada.
Mark Eramianc Department of Computer Science ; University of Saskatchewan ; Saskatoon , Canada.
Ian R Killb Institute of Environment, Health and Societies; Brunel University; London , Uxbridge , United Kingdom.
Joanna M Bridgerb Institute of Environment, Health and Societies; Brunel University; London , Uxbridge , United Kingdom.
Anthony Kusalikc Department of Computer Science ; University of Saskatchewan ; Saskatoon , Canada.
Jennifer A Mitchelle Department of Cell and Systems Biology ; University of Toronto ; Toronto , Canada.
Christopher H Eskiwa Department of Food and Bioproduct Sciences ; University of Saskatchewan ; Saskatoon , Canada.
University of Saskatchewan · CABrunel University of London · GBRoyal University Hospital · CAUniversity of Toronto · CA

Funding

Canadian Institutes of Health Research
6 · The paper itself

Abstract

Rapamycin is a well-known inhibitor of the Target of Rapamycin (TOR) signaling cascade; however, the impact of this drug on global genome function and organization in normal primary cells is poorly understood. To explore this impact, we treated primary human foreskin fibroblasts with rapamycin and observed a decrease in cell proliferation without causing cell death. Upon rapamycin treatment chromosomes 18 and 10 were repositioned to a location similar to that of fibroblasts induced into quiescence by serum reduction. Although similar changes in positioning occurred, comparative transcriptome analyses demonstrated significant divergence in gene expression patterns between rapamycin-treated and quiescence-induced fibroblasts. Rapamycin treatment induced the upregulation of cytokine genes, including those from the Interleukin (IL)-6 signaling network, such as IL-8 and the Leukemia Inhibitory Factor (LIF), while quiescent fibroblasts demonstrated up-regulation of genes involved in the complement and coagulation cascade. In addition, genes significantly up-regulated by rapamycin treatment demonstrated increased promoter occupancy of the transcription factor Signal Transducer and Activator of Transcription 5A/B (STAT5A/B). In summary, we demonstrated that the treatment of fibroblasts with rapamycin decreased proliferation, caused chromosome territory repositioning and induced STAT5A/B-mediated changes in gene expression enriched for cytokines.

Indexed as

ActinsCell LineCell ProliferationFibroblastsHumansInterleukin-6Interleukin-8Leukemia Inhibitory FactorMechanistic Target of Rapamycin Complex 1Multiprotein ComplexesPromoter Regions, GeneticSirolimusSTAT5 Transcription FactorTOR Serine-Threonine KinasesTranscriptomeTumor Suppressor ProteinsACTC1 protein, humanActinsInterleukin-6Interleukin-8Leukemia Inhibitory FactorMechanistic Target of Rapamycin Complex 1Multiprotein ComplexesSirolimusSTAT5A protein, humanSTAT5B protein, humanSTAT5 Transcription FactorTOR Serine-Threonine KinasesTumor Suppressor Proteinsprimary fibroblastquiescencerapamycinRNA-seqSTAT5A/B

Identifiers

PMID26652669
PMCPMC4915505
OpenAlexW2277337138

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.