Evidence map›Paper›PMID 26651998›Full record

ArticleeLife2015

Ternatin and improved synthetic variants kill cancer cells by targeting the elongation factor-1A ternary complex.

Jordan D Carelli, Steven G Sethofer, Geoffrey A Smith, Howard R Miller, Jillian L Simard, William C Merrick, Rishi K Jain, Nathan T Ross, Jack Taunton

Open access · goldAbstract read
In one paragraph

Article in eLife, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 1 synthesis or guideline pooled it, 57 citations in OpenAlex.

  1. Pooled it
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  12. Integration analysis of single-cell transcriptome reveals specific monocyte subsets associated with melanoma brain and leptomeningeal metastasis.Skin research and technology : official journal of International Society for Bioengineering and the Skin (ISBS) [and] International Society for Digital Imaging of Skin (ISDIS) [and] International Society for Skin Imaging (ISSI) · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Jordan D CarelliChemistry and Chemical Biology Graduate Program, University of California, San Francisco, San Francisco, United States.ORCID http://orcid.org/0000-0001-7625-7505
Steven G SethoferDepartment of Cellular and Molecular Pharmacology, University of California, San Francisco, San Francisco, United States.
Geoffrey A SmithChemistry and Chemical Biology Graduate Program, University of California, San Francisco, San Francisco, United States.
Howard R MillerNovartis Institutes for BioMedical Research, Cambridge, United States.
Jillian L SimardDepartment of Cellular and Molecular Pharmacology, University of California, San Francisco, San Francisco, United States.
William C MerrickDepartment of Biochemistry, School of Medicine, Case Western Reserve University, Cleveland, United States.
Rishi K JainNovartis Institutes for BioMedical Research, Cambridge, United States.
Nathan T RossNovartis Institutes for BioMedical Research, Cambridge, United States.
Jack TauntonDepartment of Cellular and Molecular Pharmacology, University of California, San Francisco, San Francisco, United States.
University of California, San Francisco · USNovartis (United States) · USCase Western Reserve University · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007618 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ANDERSON, MARK S · 1985 to 2020
$29.6M
RESEARCH TRAINING IN CHEMISTRY AND CHEMICAL BIOLOGYT32GM064337 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CRAIK, CHARLES SCOTT · 2002 to 2021
$7.8M
Howard Hughes Medical InstituteNIGMS NIH HHS T32 GM007618NIGMS NIH HHS T32 GM064337
6 · The paper itself

Abstract

Cyclic peptide natural products have evolved to exploit diverse protein targets, many of which control essential cellular processes. Inspired by a series of cyclic peptides with partially elucidated structures, we designed synthetic variants of ternatin, a cytotoxic and anti-adipogenic natural product whose molecular mode of action was unknown. The new ternatin variants are cytotoxic toward cancer cells, with up to 500-fold greater potency than ternatin itself. Using a ternatin photo-affinity probe, we identify the translation elongation factor-1A ternary complex (eEF1A·GTP·aminoacyl-tRNA) as a specific target and demonstrate competitive binding by the unrelated natural products, didemnin and cytotrienin. Mutations in domain III of eEF1A prevent ternatin binding and confer resistance to its cytotoxic effects, implicating the adjacent hydrophobic surface as a functional hot spot for eEF1A modulation. We conclude that the eukaryotic elongation factor-1A and its ternary complex with GTP and aminoacyl-tRNA are common targets for the evolution of cytotoxic natural products.

Indexed as

Cell DeathAntineoplastic AgentsCell Line, TumorDrug ResistanceGuanosine TriphosphateHumansMutant ProteinsMutationPeptide Elongation Factor 1Peptides, CyclicProtein BindingRNA, TransferAntineoplastic AgentsGuanosine TriphosphateMutant ProteinsPeptide Elongation Factor 1Peptides, CyclicRNA, Transferternatin heptapeptidebiochemistrycancercell biologycyclic peptideelongation factor-1Ahumannatural productprotein synthesistarget identification

Identifiers

PMID26651998
PMCPMC4786417
OpenAlexW2196232857

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.