Evidence map›Paper›PMID 26650884›Full record

ArticleACS chemical biology2016

Ca(2+) ATPase Conformational Transitions in Lipid Bilayers Mapped by Site-directed Ethylation and Solid-State NMR.

Vitaly V Vostrikov, Martin Gustavsson, Tata Gopinath, Dan Mullen, Alysha A Dicke, Vincent Truong, Gianluigi Veglia

Abstract read
In one paragraph

Article in ACS chemical biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Vitaly V VostrikovDepartment of Biochemistry, Biophysics & Molecular Biology, University of Minnesota , Minneapolis, Minnesota 55455, United States.
Martin GustavssonDepartment of Biochemistry, Biophysics & Molecular Biology, University of Minnesota , Minneapolis, Minnesota 55455, United States.
Tata GopinathDepartment of Biochemistry, Biophysics & Molecular Biology, University of Minnesota , Minneapolis, Minnesota 55455, United States.
Dan MullenDepartment of Chemistry, University of Minnesota , Minneapolis, Minnesota 55455, United States.
Alysha A DickeDepartment of Biochemistry, Biophysics & Molecular Biology, University of Minnesota , Minneapolis, Minnesota 55455, United States.
Vincent TruongDepartment of Biochemistry, Biophysics & Molecular Biology, University of Minnesota , Minneapolis, Minnesota 55455, United States.
Gianluigi VegliaDepartment of Biochemistry, Biophysics & Molecular Biology, University of Minnesota , Minneapolis, Minnesota 55455, United States.

Funding

TRAINING PROGRAM IN MUSCLE RESEARCHT32AR007612 · NIAMS · UNIVERSITY OF MINNESOTA TWIN CITIES · PI JAMES M ERVASTI, DAWN A LOWE · 2001 to 2026
$11.3M
NMR Structural Analysis of Calcium Regulation in MuscleR01GM064742 · NIGMS · UNIVERSITY OF MINNESOTA TWIN CITIES · PI VEGLIA, GIANLUIGI · 2002 to 2019
$7.1M
NIAMS NIH HHS 5T32AR007612NIAMS NIH HHS T32 AR007612NIGMS NIH HHS GM64742NIGMS NIH HHS R01 GM064742
6 · The paper itself

Abstract

To transmit signals across cellular compartments, many membrane-embedded enzymes undergo extensive conformational rearrangements. Monitoring these events in lipid bilayers by NMR at atomic resolution has been challenging due to the large size of these systems. It is further exacerbated for large mammalian proteins that are difficult to express and label with NMR-active isotopes. Here, we synthesized and engineered (13)C ethyl groups on native cysteines to map the structural transitions of the sarcoplasmic reticulum Ca(2+)-ATPase, a 110 kDa transmembrane enzyme that transports Ca(2+) into the sarcoplasmic reticulum. Using magic angle spinning NMR, we monitored the chemical shifts of the methylene and methyl groups of the derivatized cysteine residues along the major steps of the enzymatic cycle. The methylene chemical shifts are sensitive to the ATPase conformational changes induced upon nucleotide and Ca(2+) ion binding and are ideal probes for active and inactive states of the enzyme. This new approach is extendable to large mammalian enzymes and signaling proteins with native or engineered cysteine residues in their amino acid sequence.

Indexed as

Nuclear Magnetic Resonance, BiomolecularAnimalsBinding SitesCalciumCysteineLipid BilayersModels, MolecularProtein ConformationRabbitsSarcoplasmic Reticulum Calcium-Transporting ATPasesCalciumCysteineLipid BilayersSarcoplasmic Reticulum Calcium-Transporting ATPases

Identifiers

PMID26650884
PMCPMC4993155

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.