Evidence map›Paper›PMID 26650759›Full record

ArticlePloS one2015

MicroRNA Expression Profile during Aphid Feeding in Chrysanthemum (Chrysanthemum morifolium).

Xiaolong Xia, Yafeng Shao, Jiafu Jiang, Xinping Du, Liping Sheng, Fadi Chen, Weimin Fang, Zhiyong Guan, Sumei Chen

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 37 citations in OpenAlex.

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  11. Overexpression ofHorticulture research · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Xiaolong XiaCollege of Horticulture, Nanjing Agricultural University, Nanjing, China.
Yafeng ShaoCollege of Horticulture, Nanjing Agricultural University, Nanjing, China.
Jiafu JiangCollege of Horticulture, Nanjing Agricultural University, Nanjing, China.
Xinping DuCollege of Horticulture, Nanjing Agricultural University, Nanjing, China.
Liping ShengCollege of Horticulture, Nanjing Agricultural University, Nanjing, China.
Fadi ChenCollege of Horticulture, Nanjing Agricultural University, Nanjing, China.
Weimin FangCollege of Horticulture, Nanjing Agricultural University, Nanjing, China.
Zhiyong GuanCollege of Horticulture, Nanjing Agricultural University, Nanjing, China.
Sumei ChenCollege of Horticulture, Nanjing Agricultural University, Nanjing, China.
Nanjing Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MicroRNAs (miRNAs) are important regulators of gene expression, affecting many biological processes. As yet, their roles in the response of chrysanthemum to aphid feeding have not been explored. Here, the identity and abundance of miRNAs induced by aphid infestation have been obtained using high-throughput Illumina sequencing platform. Three leaf small RNA libraries were generated, one from plants infested with the aphid Macrosiphoniella sanbourni (library A), one from plants with mock puncture treatment (library M), and the third from untreated control plants (library CK). A total of 7,944,797, 7,605,251 and 9,244,002 clean unique reads, ranging from 18 to 30 nucleotides (nt) in length, were obtained from library CK, A and M, respectively. As a result, 303 conserved miRNAs belonging to 276 miRNAs families and 234 potential novel miRNAs were detected in chrysanthemum leaf, out of which 80, 100 and 79 significantly differentially expressed miRNAs were identified in the comparison of CK-VS-A, CK-VS-M and M-VS-A, respectively. Several of the differentially abundant miRNAs (in particular miR159a, miR160a, miR393a) may be associated with the plant's response to aphid infestation.

Indexed as

Gene Expression ProfilingAnimalsAphidsChrysanthemumGene Expression Regulation, PlantHigh-Throughput Nucleotide SequencingMicroRNAsReal-Time Polymerase Chain ReactionReverse Transcriptase Polymerase Chain ReactionRNA, PlantMicroRNAsRNA, Plant

Identifiers

PMID26650759
PMCPMC4674109
OpenAlexW2195856678

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.