Evidence map›Paper›PMID 26650547›Full record

ArticleRejuvenation research2016

Racemized and Isomerized Proteins in Aging Rat Teeth and Eye Lens.

Rebeccah A Warmack, Eduardo Mansilla, Rodolfo G Goya, Steven G Clarke

Abstract readComparative Study
In one paragraph

Article in Rejuvenation research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 11 citations in OpenAlex.

  1. Young Plasma Rejuvenates Blood DNA Methylation Profile, Extends Mean Lifespan, and Improves Physical Appearance in Old Rats.The journals of gerontology. Series A, Biological sciences and medical sciences · 2024
    Article
  2. Journal of the American Chemical Society · 2019
    Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 3 countries.

Rebeccah A Warmack1 Department of Chemistry and Biochemistry, The Molecular Biology Institute, University of California , Los Angeles, Los Angeles, California.
Eduardo Mansilla2 Tissue Engineering, Regenerative Medicine and Cell Therapies Laboratory, CUCAIBA, Buenos Aires Province Ministry of Public Health , Buenos Aires, Argentina .
Rodolfo G Goya3 Institute for Biochemical Research (INIBIOLP)-Cathedra of Histology B, Cathedra of Pathology B, School of Medicine, National University of La Plata , La Plata, Argentina .
Steven G Clarke1 Department of Chemistry and Biochemistry, The Molecular Biology Institute, University of California , Los Angeles, Los Angeles, California.
University of California System · USMinistry of Public Health · LBUniversidad Nacional de La Plata · AR

Funding

UCLA NIGMS T32 Program AssessmentT32GM007185 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI TORRES, JORGE · 1985 to 2020
$21.7M
NIGMS NIH HHS T32 GM007185
6 · The paper itself

Abstract

The quantification of aspartic acid racemization in the proteins of nonmetabolically active tissues can be used as a measure of chronological aging in humans and other long-lived organisms. However, very few studies have been conducted in shorter-lived animals such as rodents, which are increasingly used as genetic and metabolic models of aging. An initial study had reported significant changes in the ratio of d- to l-aspartate in rat molars with age. Using a sensitive HPLC method for the determination of d- and l-aspartate from protein hydrolysates, we found no accumulation of d-aspartate in the molars of 17 rats that ranged in age from 2 to 44 months, and the amount of d-aspartate per molar did not correspond with molar eruption date as had been previously reported. However, developing an alternate approach, we found significant accumulation of isomerized aspartyl residues in eye lens proteins that are also formed by spontaneous degradation processes. In this study, we used the human protein l-isoaspartate/d-aspartate O-methyltransferase (PCMT1) as an analytical reagent in a sensitive and convenient procedure that could be used to rapidly examine multiple samples simultaneously. We found levels of isomerized aspartyl residues to be about 35 times higher in the lens extracts of 18-month-old rats versus 2-month-old rats, suggesting that isomerization may be an effective marker for biological aging in this range of ages. Importantly, we found that the accumulation appeared to plateau in rats of 18 months and older, indicating that potentially novel mechanisms for removing altered proteins may develop with age.

Indexed as

Age FactorsAgingAnimalsAspartic AcidBiomarkersChromatography, High Pressure LiquidEye ProteinsFemaleHydrolysisIsomerismLens, CrystallineMolarProtein D-Aspartate-L-Isoaspartate MethyltransferaseProteinsProteolysisRats, Sprague-DawleyAspartic AcidBiomarkersEye ProteinsPCMT1 protein, humanProtein D-Aspartate-L-Isoaspartate MethyltransferaseProteins

Identifiers

PMID26650547
PMCPMC4971426
OpenAlexW2285166317

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.