Evidence map›Paper›PMID 26648346›Full record

SynthesisJournal of gastroenterology and hepatology2016

Helicobacter pylori vacuolating cytotoxin genotypes and preneoplastic lesions or gastric cancer risk: a meta-analysis.

Esmat Abdi, Saeid Latifi-Navid, Hamid Latifi-Navid, Bahareh Safarnejad

Abstract readMeta-Analysis
PubMed Publisher
In one paragraph

Synthesis in Journal of gastroenterology and hepatology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Virulence Genes ofCanadian journal of gastroenterology & hepatology · 2022
    Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Immunological markers andBiomedical reports · 2020
    Article
  9. Article
  10. Article
  11. Translational cancer research · 2016
    Article
  12. Article
4 · The record

Corrections and comments

  • Commented on by
    2016
5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Esmat AbdiDepartment of Biology, Faculty of Sciences, University of Mohaghegh Ardabili, Ardabil, Iran.
Saeid Latifi-NavidDepartment of Biology, Faculty of Sciences, University of Mohaghegh Ardabili, Ardabil, Iran.
Hamid Latifi-NavidDepartment of Biology, Faculty of Sciences, University of Mohaghegh Ardabili, Ardabil, Iran.
Bahareh SafarnejadDepartment of Neurology, School of Medicine, Zanjan University of Medical Sciences, Zanjan, Iran.
University of Mohaghegh Ardabili · IRZanjan University of Medical Sciences · IR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND AND

aimDisease progression to gastric cancer (GC) occurs in only a small proportion of Helicobacter pylori (H.  pylori) infected patients. The bacterium vacuolating cytotoxin A (vacA) gene polymorphisms may determine the clinical consequences. We examined the strength of this association in adult-infected populations and modeled the impact of mean age-standardized incidence rates (ASRs) of GC as a hypothesized moderator variable.

methodsPooled relative risk (RR) estimates were calculated. Subgroup, sensitivity, and meta-regression analyses were conducted.

resultsTotally, 33 studies (1446 cases/2697 controls) were analyzed. The vacA-s1 genotype was significantly associated with an increased risk of atrophic gastritis(AG), intestinal metaplasia(IM), and GC (RR = 1.116, 95% CI, 1.019-1.222; RR = 1.418, 95% CI, 1.035-1.942; and RR = 1.333, 95% CI, 1.115-1.593, respectively); however, the vacA m1 genotype strongly increased the risk of IM and GC, but not AG (RR = 1.571, 95% CI, 1.247-1.980 and RR = 1.431, 95% CI, 1.180-1.735, respectively). The vacA s1m1 allelic combination was linked to an increased risk of GC. The m1-type of vacA was more potent than s1 for predicting the risk of GC within the subgroups with the mean ASRs of 11/100,000-19/100,000 and less than 10/100,000. The meta-regression analysis indicated that the ASR of GC modified the association between H.  pylori genotypes and GC risk, where the estimated risk was significantly decreased with increasing the mean ASRs of GC (P-values = 0.025, 0.00009, and 0.0005 for s1, m1, and s1m1, respectively).

conclusionsThe H. pylori vacA-s1 and vacA-m1 allelic variants strongly increased susceptibility to IM and GC; however, only s1 showed an association with AG. These associations were largely influenced by geographic variations in the GC incidence rate.

Indexed as

AllelesBacterial ProteinsGastritis, AtrophicGenetic VariationGenotypeHelicobacter pyloriHumansIncidenceIntestinesMetaplasiaRegression AnalysisRiskStomach NeoplasmsBacterial ProteinsVacA protein, Helicobacter pyloriage-standardized incidence rategastric cancerH. pylori genotypesmeta-analysismeta-regression analysis

Identifiers

PMID26648346
OpenAlexW2195753296

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.