Evidence map›Paper›PMID 26648113›Full record

SynthesisScientific reports2015

Sensitivity and specificity of Cobas TaqMan MTB real-time polymerase chain reaction for culture-proven Mycobacterium tuberculosis: meta-analysis of 26999 specimens from 17 Studies.

Nobuyuki Horita, Masaki Yamamoto, Takashi Sato, Toshinori Tsukahara, Hideyuki Nagakura, Ken Tashiro, Yuji Shibata, Hiroki Watanabe, Kenjiro Nagai, Kentaro Nakashima and 5 more

Open access · goldAbstract readMeta-AnalysisSystematic Review
In one paragraph

Synthesis in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 4 pooled it
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 4 syntheses or guidelines pooled it, 29 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Pooled it
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Recent advances in tuberculosis diagnostics in resource-limited settings.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2018
    Review
  11. Review
  12. Article
  13. Tuberculosis Diagnosis and Management: Recent Advances.Journal of global infectious diseases
    Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 2 institutions in 1 country.

Nobuyuki HoritaDepartment of Pulmonology, Yokohama City University Graduate School of Medicine. 3-9, Fukuura, Kanazawa, Yokohama, Japan.
Masaki YamamotoDepartment of Pulmonology, Yokohama City University Graduate School of Medicine. 3-9, Fukuura, Kanazawa, Yokohama, Japan.
Takashi SatoDepartment of Pulmonology, Yokohama City University Graduate School of Medicine. 3-9, Fukuura, Kanazawa, Yokohama, Japan.
Toshinori TsukaharaDepartment of Pulmonology, Yokohama City University Graduate School of Medicine. 3-9, Fukuura, Kanazawa, Yokohama, Japan.
Hideyuki NagakuraDepartment of Pulmonology, Yokohama City University Graduate School of Medicine. 3-9, Fukuura, Kanazawa, Yokohama, Japan.
Ken TashiroDepartment of Pulmonology, Yokohama City University Graduate School of Medicine. 3-9, Fukuura, Kanazawa, Yokohama, Japan.
Yuji ShibataDepartment of Pulmonology, Yokohama City University Graduate School of Medicine. 3-9, Fukuura, Kanazawa, Yokohama, Japan.
Hiroki WatanabeDepartment of Pulmonology, Yokohama City University Graduate School of Medicine. 3-9, Fukuura, Kanazawa, Yokohama, Japan.
Kenjiro NagaiDepartment of Pulmonology, Yokohama City University Graduate School of Medicine. 3-9, Fukuura, Kanazawa, Yokohama, Japan.
Kentaro NakashimaDepartment of Pulmonology, Yokohama City University Graduate School of Medicine. 3-9, Fukuura, Kanazawa, Yokohama, Japan.
Ryota UshioDepartment of Pulmonology, Yokohama City University Graduate School of Medicine. 3-9, Fukuura, Kanazawa, Yokohama, Japan.
Misako IkedaDepartment of Pulmonology, Yokohama City University Graduate School of Medicine. 3-9, Fukuura, Kanazawa, Yokohama, Japan.
Kentaro SakamakiDepartment of Biostatistics, Yokohama City University Graduate School of Medicine. 3-9, Fukuura, Kanazawa, Yokohama, Japan.
Takashi YoshiyamaDivision of Respiratory Medicine, Japan-Anti-Tuberculosis Association Fukujuji Hospital. 3-1-24, Matsuyama, Kiyose, Tokyo, Japan.
Takeshi KanekoDepartment of Pulmonology, Yokohama City University Graduate School of Medicine. 3-9, Fukuura, Kanazawa, Yokohama, Japan.
Yokohama City University · JPJapan Anti Tuberculosis Association · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Since 2010, studies on the diagnostic accuracy of COBAS TaqMan MTB (CTM) have been frequently reported with an unignorable discrepancy. The key inclusion criterion for this systematic review was original studies that could provide sufficient data for calculating the sensitivity and the specificity of CTM for M tuberculosis (TB) or M tuberculosis complex. The reference test was Mycobacterium culture. We used bivariate model for meta-analyses. Of the 201 candidate articles, we finally identified 17 eligible articles.Concerning the respiratory specimens, 1900 culture positive specimens and 20983 culture negative specimens from 15 studies were assessed. This provided the summary estimate sensitivity of 0.808 (95% CI 0.758-0.850) and the summary estimate specificity of 0.990 (95% CI 0.981-0.994). The area under curve was 0.956. The diagnostic odds ratio was 459 (95% CI 261-805, I(2) 26%). For the smear positive respiratory specimens, the sensitivity was 0.952 (95% CI 0.926-0.969) and the specificity was 0.916 (95% CI 0.797-0.968). For the smear negative respiratory specimens, the sensitivity and the specificity were 0.600 (95% CI 0.459-0.726) and 0.989 (95% CI 0.981-0.993), respectively. The diagnostic accuracy was poorer for the non-respiratory specimens, than for the respiratory specimens, but was acceptable. We believe that the information obtained from this study will aid physicians' decision making.

Indexed as

HumansMycobacterium tuberculosisReal-Time Polymerase Chain ReactionReproducibility of ResultsROC CurveSensitivity and SpecificityTuberculosisTuberculosis, Pulmonary

Identifiers

PMID26648113
PMCPMC4673449
OpenAlexW2399176174

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.