Evidence map›Paper›PMID 26647728›Full record

ArticleNature communications2015

Frequent alterations in cytoskeleton remodelling genes in primary and metastatic lung adenocarcinomas.

Kui Wu, Xin Zhang, Fuqiang Li, Dakai Xiao, Yong Hou, Shida Zhu, Dongbing Liu, Xiaofei Ye, Mingzhi Ye, Jie Yang and 36 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 78 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
78citing papers in PubMed, 1 pooled it
5.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

78 citing papers in PubMed, 1 synthesis or guideline pooled it, 112 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Screening for viruses in lung adenocarcinoma in China.Chinese medical journal pulmonary and critical care medicine · 2024
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  10. IQGAP3 Is an Important Mediator of Skin Inflammatory Diseases.International journal of molecular sciences · 2024
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  13. FOXD2 regulations IQGAP3 mediated CaThe Kaohsiung journal of medical sciences · 2023
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  14. Article
  15. Article
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  18. Follow-Up Biomarkers in the Evolution of Prostate Cancer, Levels ofInternational journal of molecular sciences · 2022
    Article
  19. Article
  20. Article

18 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

46 authors at 7 institutions in 4 countries.

Kui WuBGI-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China.
Xin ZhangDepartment of Thoracic Surgery, The First Affiliated Hospital of Guangzhou Medical University, Guangzhou 510120, China.
Fuqiang LiBGI-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China.
Dakai XiaoDepartment of Thoracic Surgery, The First Affiliated Hospital of Guangzhou Medical University, Guangzhou 510120, China.
Yong HouBGI-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China.
Shida ZhuBGI-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China.
Dongbing LiuBGI-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China.
Xiaofei YeBGI-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China.
Mingzhi YeBGI-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China.
Jie YangBGI-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China.
Libin ShaoBGI-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China.
Hui PanDepartment of Thoracic Surgery, The First Affiliated Hospital of Guangzhou Medical University, Guangzhou 510120, China.
Na LuBGI-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China.
Yuan YuBGI-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China.
Liping LiuDepartment of Thoracic Surgery, The First Affiliated Hospital of Guangzhou Medical University, Guangzhou 510120, China.
Jin LiDepartment of Thoracic Surgery, The First Affiliated Hospital of Guangzhou Medical University, Guangzhou 510120, China.
Liyan HuangDepartment of Thoracic Surgery, The First Affiliated Hospital of Guangzhou Medical University, Guangzhou 510120, China.
Hailing TangDepartment of Thoracic Surgery, The First Affiliated Hospital of Guangzhou Medical University, Guangzhou 510120, China.
Qiuhua DengDepartment of Thoracic Surgery, The First Affiliated Hospital of Guangzhou Medical University, Guangzhou 510120, China.
Yue ZhengBGI-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China.
Lihua PengBGI-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China.
Geng LiuBGI-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China.
Xia GuDepartment of Pathology, The First Affiliated Hospital of Guangzhou Medical University, Guangzhou 510120, China.
Ping HeDepartment of Pathology, The First Affiliated Hospital of Guangzhou Medical University, Guangzhou 510120, China.
Yingying GuGuangzhou Institute of Respiratory Disease &State Key Laboratory of Respiratory Disease, Guangzhou 510120, China.
Weixuan LinResearch Center for Translational Medicine, The First Affiliated Hospital of Guangzhou Medical University, Guangzhou 510120, China.
Huiming HeResearch Center for Translational Medicine, The First Affiliated Hospital of Guangzhou Medical University, Guangzhou 510120, China.
Guoyun XieBGI-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China.
Han LiangBGI-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China.
Na AnBGI-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China.
Hui WangBGI-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China.
Manuel TeixeiraGenetics Department and Research Center, Portuguese Oncology Institute, Porto 4200-072, Portugal.
Joana VieiraGenetics Department and Research Center, Portuguese Oncology Institute, Porto 4200-072, Portugal.
Wenhua LiangDepartment of Thoracic Surgery, The First Affiliated Hospital of Guangzhou Medical University, Guangzhou 510120, China.
Xin ZhaoBGI-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China.
Zhiyu PengBGI-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China.
Feng MuBGI-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China.
Xiuqing ZhangBGI-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China.
Xun XuBGI-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China.
Huanming YangBGI-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China.
Karsten KristiansenBGI-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China.
Jian WangBGI-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China.
Nanshan ZhongGuangzhou Institute of Respiratory Disease &State Key Laboratory of Respiratory Disease, Guangzhou 510120, China.
Jun WangBGI-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China.
Qiang Pan-HammarströmBGI-Shenzhen, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China.
Jianxing HeDepartment of Thoracic Surgery, The First Affiliated Hospital of Guangzhou Medical University, Guangzhou 510120, China.
BGI Group (China) · CNGuangzhou Medical University · CNFirst Affiliated Hospital of Guangzhou Medical University · CNInstituto Português de Oncologia Francisco Gentil · PTUniversity of Copenhagen · DKNational Clinical Research Center for Digestive Diseases · CNZhejiang University · CN

Funding

European Research Council 242551
6 · The paper itself

Abstract

The landscape of genetic alterations in lung adenocarcinoma derived from Asian patients is largely uncharacterized. Here we present an integrated genomic and transcriptomic analysis of 335 primary lung adenocarcinomas and 35 corresponding lymph node metastases from Chinese patients. Altogether 13 significantly mutated genes are identified, including the most commonly mutated gene TP53 and novel mutation targets such as RHPN2, GLI3 and MRC2. TP53 mutations are furthermore significantly enriched in tumours from patients harbouring metastases. Genes regulating cytoskeleton remodelling processes are also frequently altered, especially in metastatic samples, of which the high expression level of IQGAP3 is identified as a marker for poor prognosis. Our study represents the first large-scale sequencing effort on lung adenocarcinoma in Asian patients and provides a comprehensive mutational landscape for both primary and metastatic tumours. This may thus form a basis for personalized medical care and shed light on the molecular pathogenesis of metastatic lung adenocarcinoma.

Indexed as

AdenocarcinomaAdenocarcinoma of LungAdultAgedAged, 80 and overAsian PeopleCytoskeletonFemaleHumansLung NeoplasmsLymphatic MetastasisMaleMiddle AgedMutation

Identifiers

PMID26647728
PMCPMC4682110
OpenAlexW2270237907

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.