Evidence map›Paper›PMID 26646386›Full record

ArticleMolecular biotechnology2016

Proteomic Analysis of Isogenic Rice Reveals Proteins Correlated with Aroma Compound Biosynthesis at Different Developmental Stages.

Aphinya Wongpia, Sittiruk Roytrakul, Mika Nomura, Shigeyuki Tajima, Khemika Lomthaisong, Sugunya Mahatheeranont, Hataichanoke Niamsup

Abstract read
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Article in Molecular biotechnology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.1field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Multiple mutations inJournal of genetics · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Aphinya WongpiaCenter of Excellence for Innovation in Chemistry, Chiang Mai University, Chiang Mai, 50200, Thailand.
Sittiruk RoytrakulGenome Institute, National Center for Genetic Engineering and Biotechnology, National Science and Technology Development Agency, Pathumthani, 12120, Thailand.
Mika NomuraFaculty of Agriculture, Kagawa University, Miki-cho, Kita-Gun, Kagawa, 761-0795, Japan.
Shigeyuki TajimaFaculty of Agriculture, Kagawa University, Miki-cho, Kita-Gun, Kagawa, 761-0795, Japan.
Khemika LomthaisongForensic Science Program, Faculty of Science, Khon Kaen University, Khon Kaen, 40002, Thailand.
Sugunya MahatheeranontCenter of Excellence for Innovation in Chemistry, Chiang Mai University, Chiang Mai, 50200, Thailand.
Hataichanoke NiamsupDepartment of Chemistry, Faculty of Science, Chiang Mai University, Chiang Mai, 50200, Thailand. hataichanoke.n@cmu.ac.th.ORCID http://orcid.org/0000-0003-0271-777X
Chiang Mai University · THKagawa University · JPKhon Kaen University · THNational Science and Technology Development Agency · TH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fragrant rice has a potent flavor compound, 2-acetyl-1-pyrroline (2AP). A better understanding of the 2AP biosynthetic pathway is gained by proteomic analysis of two isogenic lines of Thai jasmine rice, Oryza sativa L. cv. Khao Dawk Mali 105, which differ only in the aromatic gene Os2AP. The protein profiles of two lines, from six growth stages, seedling to grain filling, had 41 identifiable protein spots. Four of these spots were betaine aldehyde dehydrogenase, a key enzyme responsible for 2AP production. This enzyme occurred in every growth stage of the non-aromatic rice line except smaller amount detected in the hard grain-filling stage of the aromatic line. Glyceraldehyde 3-phosphate dehydrogenase and aspartate aminotransferase, observed in the aromatic line, may involve in the metabolism of precursors for 2AP biosynthesis. In addition, glutamine synthetase and 1-cys peroxiredoxin A which function in ammonia reassimilation and hydrogen peroxide detoxification were unique in the aromatic line. However, proteins that correspond to photosynthesis and the nutrient reservoir were only detected in lower abundances. This possibly explains why the aroma rice grain weight is low. Our study proposed the possible role of these remarkable proteins which involved in 2AP biosynthesis in jasmine rice.

Indexed as

Betaine-Aldehyde DehydrogenaseCysteine EndopeptidasesGlyceraldehyde-3-Phosphate Dehydrogenase (Phosphorylating)OdorantsOryzaPlant ProteinsProteomicsPyrroles2-acetyl-1-pyrrolineBetaine-Aldehyde DehydrogenaseCysteine EndopeptidasesGlyceraldehyde-3-Phosphate Dehydrogenase (Phosphorylating)Plant ProteinsPyrroles2-acetyl-1-pyrrolineAroma compoundBetaine aldehyde dehydrogenaseIsogenic riceJasmine riceProteomics

Identifiers

PMID26646386
OpenAlexW2285086048

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.