Evidence map›Paper›PMID 26645646›Full record

ArticleCell cycle (Georgetown, Tex.)2015

Cell cycle-dependent changes in H3K56ac in human cells.

Stanislav Stejskal, Karel Stepka, Lenka Tesarova, Karel Stejskal, Martina Matejkova, Pavel Simara, Zbynek Zdrahal, Irena Koutna

Open access · bronzeAbstract read
In one paragraph

Article in Cell cycle (Georgetown, Tex.), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.5field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
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  4. Review
  5. [PRIONPathogens (Basel, Switzerland) · 2022
    Article
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  13. Network analysis identifies chromosome intermingling regions as regulatory hotspots for transcription.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Stanislav Stejskala Centre for Biomedical Image Analysis; Faculty of Informatics; Masaryk University ; Brno , Czech Republic.
Karel Stepkaa Centre for Biomedical Image Analysis; Faculty of Informatics; Masaryk University ; Brno , Czech Republic.
Lenka Tesarovaa Centre for Biomedical Image Analysis; Faculty of Informatics; Masaryk University ; Brno , Czech Republic.
Karel Stejskalb Research Group - Proteomics; Central European Institute of Technology; Masaryk University ; Brno , Czech Republic.
Martina Matejkovaa Centre for Biomedical Image Analysis; Faculty of Informatics; Masaryk University ; Brno , Czech Republic.
Pavel Simaraa Centre for Biomedical Image Analysis; Faculty of Informatics; Masaryk University ; Brno , Czech Republic.
Zbynek Zdrahalb Research Group - Proteomics; Central European Institute of Technology; Masaryk University ; Brno , Czech Republic.
Irena Koutnaa Centre for Biomedical Image Analysis; Faculty of Informatics; Masaryk University ; Brno , Czech Republic.
Masaryk University · CZCentral European Institute of Technology · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The incorporation of histone H3 with an acetylated lysine 56 (H3K56ac) into the nucleosome is important for chromatin remodeling and serves as a marker of new nucleosomes during DNA replication and repair in yeast. However, in human cells, the level of H3K56ac is greatly reduced, and its role during the cell cycle is controversial. Our aim was to determine the potential of H3K56ac to regulate cell cycle progression in different human cell lines. A significant increase in the number of H3K56ac foci, but not in H3K56ac protein levels, was observed during the S and G2 phases in cancer cell lines, but was not observed in embryonic stem cell lines. Despite this increase, the H3K56ac signal was not present in late replication chromatin, and H3K56ac protein levels did not decrease after the inhibition of DNA replication. H3K56ac was not tightly associated with the chromatin and was primarily localized to active chromatin regions. Our results support the role of H3K56ac in transcriptionally active chromatin areas but do not confirm H3K56ac as a marker of newly synthetized nucleosomes in DNA replication.

Indexed as

Cell CycleChromatinDNA ReplicationG2 PhaseHistonesHL-60 CellsHumansMass SpectrometryNucleosomesSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsS PhaseChromatinHistonesNucleosomesSaccharomyces cerevisiae ProteinsCell cycleChromatinDNA replicationH3K56acMammalian cellsNucleosome

Identifiers

PMID26645646
PMCPMC4825721
OpenAlexW2190807730

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.