Evidence map›Paper›PMID 26644503›Full record

ArticlePlant physiology2016

CYTOKININ OXIDASE/DEHYDROGENASE3 Maintains Cytokinin Homeostasis during Root and Nodule Development in Lotus japonicus.

Dugald E Reid, Anne B Heckmann, Ondřej Novák, Simon Kelly, Jens Stougaard

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed, 1 pooled it
15.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 1 synthesis or guideline pooled it, 114 citations in OpenAlex.

  1. Pooled it
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  5. Molecular Insights into the Positive Role of Soybean Nodulation by GmWRKY17.International journal of molecular sciences · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Dugald E ReidCentre for Carbohydrate Recognition and Signalling (CARB), Department of Molecular Biology and Genetics, Aarhus University, Gustav Wieds Vej 10, Aarhus C, 8000, Denmark (D.E.R., A.B.H., S.K., J.S.); and Laboratory of Growth Regulators and Department of Chemical Biology and Genetics, Palacký University and Institute of Experimental Botany, Academy of Sciences of the Czech Republic, CZ-78371, Olomouc, Czech Republic (O.N.).ORCID http://orcid.org/0000-0001-9291-9775
Anne B HeckmannCentre for Carbohydrate Recognition and Signalling (CARB), Department of Molecular Biology and Genetics, Aarhus University, Gustav Wieds Vej 10, Aarhus C, 8000, Denmark (D.E.R., A.B.H., S.K., J.S.); and Laboratory of Growth Regulators and Department of Chemical Biology and Genetics, Palacký University and Institute of Experimental Botany, Academy of Sciences of the Czech Republic, CZ-78371, Olomouc, Czech Republic (O.N.).
Ondřej NovákCentre for Carbohydrate Recognition and Signalling (CARB), Department of Molecular Biology and Genetics, Aarhus University, Gustav Wieds Vej 10, Aarhus C, 8000, Denmark (D.E.R., A.B.H., S.K., J.S.); and Laboratory of Growth Regulators and Department of Chemical Biology and Genetics, Palacký University and Institute of Experimental Botany, Academy of Sciences of the Czech Republic, CZ-78371, Olomouc, Czech Republic (O.N.).ORCID http://orcid.org/0000-0003-3452-0154
Simon KellyCentre for Carbohydrate Recognition and Signalling (CARB), Department of Molecular Biology and Genetics, Aarhus University, Gustav Wieds Vej 10, Aarhus C, 8000, Denmark (D.E.R., A.B.H., S.K., J.S.); and Laboratory of Growth Regulators and Department of Chemical Biology and Genetics, Palacký University and Institute of Experimental Botany, Academy of Sciences of the Czech Republic, CZ-78371, Olomouc, Czech Republic (O.N.).
Jens StougaardCentre for Carbohydrate Recognition and Signalling (CARB), Department of Molecular Biology and Genetics, Aarhus University, Gustav Wieds Vej 10, Aarhus C, 8000, Denmark (D.E.R., A.B.H., S.K., J.S.); and Laboratory of Growth Regulators and Department of Chemical Biology and Genetics, Palacký University and Institute of Experimental Botany, Academy of Sciences of the Czech Republic, CZ-78371, Olomouc, Czech Republic (O.N.) stougaard@mbg.au.dk.ORCID http://orcid.org/0000-0002-9312-2685
Aarhus University · DKCzech Academy of Sciences, Institute of Experimental Botany · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cytokinins are required for symbiotic nodule development in legumes, and cytokinin signaling responses occur locally in nodule primordia and in developing nodules. Here, we show that the Lotus japonicus Ckx3 cytokinin oxidase/dehydrogenase gene is induced by Nod factor during the early phase of nodule initiation. At the cellular level, pCkx3::YFP reporter-gene studies revealed that the Ckx3 promoter is active during the first cortical cell divisions of the nodule primordium and in growing nodules. Cytokinin measurements in ckx3 mutants confirmed that CKX3 activity negatively regulates root cytokinin levels. Particularly, tZ and DHZ type cytokinins in both inoculated and uninoculated roots were elevated in ckx3 mutants, suggesting that these are targets for degradation by the CKX3 cytokinin oxidase/dehydrogenase. The effect of CKX3 on the positive and negative roles of cytokinin in nodule development, infection and regulation was further clarified using ckx3 insertion mutants. Phenotypic analysis indicated that ckx3 mutants have reduced nodulation, infection thread formation and root growth. We also identify a role for cytokinin in regulating nodulation and nitrogen fixation in response to nitrate as ckx3 phenotypes are exaggerated at increased nitrate levels. Together, these findings show that cytokinin accumulation is tightly regulated during nodulation in order to balance the requirement for cell divisions with negative regulatory effects of cytokinin on infection events and root development.

Indexed as

HomeostasisAllelesCell DifferentiationCytokininsGenes, PlantLotusMeristemMutationNitratesNitrogen FixationOxidoreductasesPhenotypePhylogenyPlant ProteinsPlant Root NodulationPromoter Regions, Geneticcytokinin oxidaseCytokininsNitratesOxidoreductasesPlant Proteins

Identifiers

PMID26644503
PMCPMC4734552
OpenAlexW2195062068

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.