Evidence map›Paper›PMID 26644467›Full record

ArticleThe Journal of biological chemistry2016

α-Synuclein Amyloid Fibrils with Two Entwined, Asymmetrically Associated Protofibrils.

Altaira D Dearborn, Joseph S Wall, Naiqian Cheng, J Bernard Heymann, Andrey V Kajava, Jobin Varkey, Ralf Langen, Alasdair C Steven

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
6.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 51 citations in OpenAlex.

  1. Review
  2. Article
  3. Aggregation of Disordered Proteins Associated with Neurodegeneration.International journal of molecular sciences · 2023
    Review
  4. Article
  5. A Brain-Penetrant Stearoyl-CoA Desaturase Inhibitor Reverses α-Synuclein Toxicity.Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics · 2022
    Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Interplay between α-synuclein amyloid formation and membrane structure.Biochimica et biophysica acta. Proteins and proteomics · 2019
    Review
  12. Article
  13. A new era for understanding amyloid structures and disease.Nature reviews. Molecular cell biology · 2018
    Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 4 countries.

Altaira D DearbornFrom the Laboratory of Structural Biology Research, National Institute of Arthritis and Musculoskeletal and Skin Diseases, National Institutes of Health, Bethesda, Maryland 20892.
Joseph S Wallthe Department of Biology, Brookhaven National Laboratory, Upton, New York 19973.
Naiqian ChengFrom the Laboratory of Structural Biology Research, National Institute of Arthritis and Musculoskeletal and Skin Diseases, National Institutes of Health, Bethesda, Maryland 20892.
J Bernard HeymannFrom the Laboratory of Structural Biology Research, National Institute of Arthritis and Musculoskeletal and Skin Diseases, National Institutes of Health, Bethesda, Maryland 20892.
Andrey V Kajavathe Centre de Recherches de Biochimie Macromoléculaire, CNRS, University of Montpellier, Montpellier 34172, France, the University ITMO, Institute of Bioengineering, 197101 St. Petersburg, Russia.
Jobin Varkeythe Zilkha Neurogenetic Institute, University of Southern California, Los Angeles, California 90033, and Karunya University, Coimbatore, Tamil Nadu 641 114, India.
Ralf Langenthe Zilkha Neurogenetic Institute, University of Southern California, Los Angeles, California 90033, and.
Alasdair C StevenFrom the Laboratory of Structural Biology Research, National Institute of Arthritis and Musculoskeletal and Skin Diseases, National Institutes of Health, Bethesda, Maryland 20892, stevena@mail.nih.gov.
National Institute of Arthritis and Musculoskeletal and Skin Diseases · USUniversity of Southern California · USBrookhaven National Laboratory · USCentre de Recherche en Biologie cellulaire de Montpellier · FRNational Institutes of Health · US

Funding

Structural Biology of Amyloid and Amyloid-like ProteinsZIAAR041157 · NIAMS · NATIONAL INSTITUTE OF ARTHRITIS AND MUSCULOSKELETAL AND SKIN DISEASES · PI STEVEN, ALASDAIR C. · 2009 to 2018
$5.4M
Molecular mechanisms of huntingtin misfoldingR01NS084345 · NINDS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI LANGEN, RALF · 2015 to 2019
$2.2M
NINDS NIH HHS 1R01NS084345NINDS NIH HHS R01 NS084345
6 · The paper itself

Abstract

Parkinson disease and other progressive neurodegenerative conditions are characterized by the intracerebral presence of Lewy bodies, containing amyloid fibrils of α-synuclein. We used cryo-electron microscopy and scanning transmission electron microscopy (STEM) to study in vitro-assembled fibrils. These fibrils are highly polymorphic. Focusing on twisting fibrils with an inter-crossover spacing of 77 nm, our reconstructions showed them to consist of paired protofibrils. STEM mass per length data gave one subunit per 0.47 nm axial rise per protofibril, consistent with a superpleated β-structure. The STEM images show two thread-like densities running along each of these fibrils, which we interpret as ladders of metal ions. These threads confirmed the two-protofibril architecture of the 77-nm twisting fibrils and allowed us to identify this morphotype in STEM micrographs. Some other, but not all, fibril morphotypes also exhibit dense threads, implying that they also present a putative metal binding site. We propose a molecular model for the protofibril and suggest that polymorphic variant fibrils have different numbers of protofibrils that are associated differently.

Indexed as

alpha-SynucleinAmino Acid SequenceAmyloidBinding SitesCryoelectron MicroscopyHumansImage Processing, Computer-AssistedIonsLewy BodiesMicroscopy, Electron, Scanning TransmissionMolecular Sequence DataProtein Structure, SecondarySequence Homology, Amino Acidalpha-SynucleinAmyloidIonsamyloidcross-β structurecryo-electron microscopyfibrilmetalloproteinmicroscopic imagingmicroscopymolecular mass measurementsscanning transmission electron microscopysuperpleated β structure

Identifiers

PMID26644467
PMCPMC4732214
OpenAlexW2193013178

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.