Evidence map›Paper›PMID 26643365›Full record

ArticleThe New phytologist2016

Structural polymorphisms and distinct genomic composition suggest recurrent origin and ongoing evolution of B chromosomes in the Prospero autumnale complex (Hyacinthaceae).

Tae-Soo Jang, John S Parker, Hanna Weiss-Schneeweiss

Abstract read
In one paragraph

Article in The New phytologist, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. B chromosomes put the 'super' in supernumerary.Trends in genetics : TIG · 2026
    Review
  3. Article
  4. Karyotype Variability in WildPlants (Basel, Switzerland) · 2024
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Tae-Soo JangDepartment of Botany and Biodiversity Research, University of Vienna, Rennweg 14, A-1030, Vienna, Austria.
John S ParkerCambridge University Botanic Garden, Cambridge, CB2 1JF, UK.
Hanna Weiss-SchneeweissDepartment of Botany and Biodiversity Research, University of Vienna, Rennweg 14, A-1030, Vienna, Austria.

Funding

Austrian Science Fund FWF P 21440
6 · The paper itself

Abstract

Supernumerary B chromosomes (Bs) are genomic parasitic components, originating from the A complement via chromosomal rearrangements, which follow their own evolutionary trajectories. They often contain repetitive DNAs, some shared with regular chromosomes and some newly evolved. Genomic composition, origin and evolution of Bs have been analysed in the chromosomally variable Prospero autumnale complex. Two rDNAs and a satellite DNA (PaB6) from regular chromosomes were mapped to Bs of 26 plants from three diploid cytotypes, their hybrids and polyploid derivatives. In homoploid diploid hybrids, genomic in situ hybridization (GISH) allowed B painting with the parental DNAs. Bs were structurally variable and highly enriched in 5S rDNA and satDNA PaB6, and rarely in 35S rDNA. Eleven combinations of rDNA and PaB6 localization were observed. The quantities of PaB6 in Bs and regular chromosomes were not correlated, suggesting amplification mechanisms other than recombination. PaB6 and 5S rDNA amounts increased with increasing ploidy level. GISH revealed two independent origins of Bs. The structural variation, repeat content, repeat-type fluctuations and differing genomic affinities of Bs in different cytotypes suggest that they represent young proto-B chromosomes. Bs in P. autumnale probably form recurrently as by-products of the extensive genome restructuring within this chromosomally variable species complex.

Indexed as

Biological EvolutionGenome, PlantPolymorphism, GeneticAsparagaceaeChromosomes, PlantDiploidyDNA, RibosomalDNA, SatelliteIn Situ Hybridization, FluorescenceMeiosisPolyploidyTandem Repeat SequencesDNA, RibosomalDNA, SatelliteB-chromosome evolutionB-chromosome paintingfluorescence in situ hybridization (FISH)genomic in situ hybridization (GISH)polyploidsProspero autumnale complexrDNA (5S and 35S rDNA)satellite DNA PaB6

Identifiers

PMID26643365
PMCPMC4949986

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.