Evidence map›Paper›PMID 26642313›Full record

ArticlePloS one2015

Studies on the Coordination of Ribosomal Protein Assembly Events Involved in Processing and Stabilization of Yeast Early Large Ribosomal Subunit Precursors.

Uli Ohmayer, Álvaro Gil-Hernández, Martina Sauert, Pilar Martín-Marcos, Mercedes Tamame, Herbert Tschochner, Joachim Griesenbeck, Philipp Milkereit

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Uli OhmayerLehrstuhl für Biochemie III, Universität Regensburg, Regensburg, Germany.
Álvaro Gil-HernándezInstituto de Biología Funcional y Genómica (IBFG), CSIC/Universidad de Salamanca, Salamanca, Spain.
Martina SauertLehrstuhl für Biochemie III, Universität Regensburg, Regensburg, Germany.
Pilar Martín-MarcosInstituto de Biología Funcional y Genómica (IBFG), CSIC/Universidad de Salamanca, Salamanca, Spain.
Mercedes TamameInstituto de Biología Funcional y Genómica (IBFG), CSIC/Universidad de Salamanca, Salamanca, Spain.
Herbert TschochnerLehrstuhl für Biochemie III, Universität Regensburg, Regensburg, Germany.
Joachim GriesenbeckLehrstuhl für Biochemie III, Universität Regensburg, Regensburg, Germany.
Philipp MilkereitLehrstuhl für Biochemie III, Universität Regensburg, Regensburg, Germany.
University of Regensburg · DEUniversidad de Salamanca · ESInstituto de Biología Funcional y Genómica · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cellular production of ribosomes involves the formation of highly defined interactions between ribosomal proteins (r-proteins) and ribosomal RNAs (rRNAs). Moreover in eukaryotic cells, efficient ribosome maturation requires the transient association of a large number of ribosome biogenesis factors (RBFs) with newly forming ribosomal subunits. Here, we investigated how r-protein assembly events in the large ribosomal subunit (LSU) rRNA domain II are coordinated with each other and with the association of RBFs in early LSU precursors of the yeast Saccharomyces cerevisiae. Specific effects on the pre-ribosomal association of RBFs could be observed in yeast mutants blocked in LSU rRNA domain II assembly. Moreover, formation of a cluster of r-proteins was identified as a downstream event in LSU rRNA domain II assembly. We analyzed in more detail the functional relevance of eukaryote specific bridges established by this r-protein cluster between LSU rRNA domain II and VI and discuss how they can support the stabilization and efficient processing of yeast early LSU precursor RNAs.

Indexed as

Carrier ProteinsModels, MolecularNuclear ProteinsProtein ConformationProtein Interaction Domains and MotifsProtein Processing, Post-TranslationalProtein StabilityRibosomal ProteinsRibosome Subunits, Large, EukaryoticRNA-Binding ProteinsRNA, FungalRNA Processing, Post-TranscriptionalRNA, RibosomalSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsCarrier ProteinsNOC2 protein, S cerevisiaeNuclear Proteinsribosomal protein L16Ribosomal ProteinsRNA-Binding ProteinsRNA, FungalRNA, RibosomalSaccharomyces cerevisiae Proteins

Identifiers

PMID26642313
PMCPMC4671574
OpenAlexW2263144146

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.