Evidence map›Paper›PMID 26642204›Full record

ArticlePloS one2015

Clues on Syntenic Relationship among Some Species of Oryzomyini and Akodontini Tribes (Rodentia: Sigmodontinae).

Pablo Suárez, Cleusa Yoshiko Nagamachi, Cecilia Lanzone, Matias Maximiliano Malleret, Patricia Caroline Mary O'Brien, Malcolm Andrew Ferguson-Smith, Julio Cesar Pieczarka

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

Pablo SuárezLaboratório de Citogenética, Centro de Estudos Avançados da Biodiversidade, ICB, UFPa, Belém, Pará, Brazil.
Cleusa Yoshiko NagamachiLaboratório de Citogenética, Centro de Estudos Avançados da Biodiversidade, ICB, UFPa, Belém, Pará, Brazil.
Cecilia LanzoneLaboratorio de Genética Evolutiva, IBS, FCEQyN, CONICET-UNaM, Posadas, Misiones, Argentina.
Matias Maximiliano MalleretLaboratorio de Genética Evolutiva, IBS, FCEQyN, CONICET-UNaM, Posadas, Misiones, Argentina.
Patricia Caroline Mary O'BrienCambridge Resource Centre for Comparative Genomics, Department of Veterinary Medicine, University of Cambridge, Cambridge, United Kingdom.
Malcolm Andrew Ferguson-SmithCambridge Resource Centre for Comparative Genomics, Department of Veterinary Medicine, University of Cambridge, Cambridge, United Kingdom.
Julio Cesar PieczarkaLaboratório de Citogenética, Centro de Estudos Avançados da Biodiversidade, ICB, UFPa, Belém, Pará, Brazil.
National Council for Scientific and Technological Development · BRNational University of Misiones · ARGenomics (United Kingdom) · GBUniversity of Cambridge · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sigmodontinae rodents represent one of the most diverse and complex components of the mammalian fauna of South America. Among them most species belongs to Oryzomyini and Akodontini tribes. The highly specific diversification observed in both tribes is characterized by diploid complements, which vary from 2n = 10 to 86. Given this diversity, a consistent hypothesis about the origin and evolution of chromosomes depends on the correct establishment of synteny analyzed in a suitable phylogenetic framework. The chromosome painting technique has been particularly useful for identifying chromosomal synteny. In order to extend our knowledge of the homeological relationships between Akodontini and Oryzomyini species, we analyzed the species Akodon montensis (2n = 24) and Thaptomys nigrita (2n = 52) both from the tribe Akodontini, with chromosome probes of Hylaeamys megacephalus (2n = 54) of the tribe Oryzomyini. The results indicate that at least 12 of the 26 autosomes of H. megacephalus show conserved synteny in A. montensis and 14 in T. nigrita. The karyotype of Akodon montensis, as well as some species of the Akodon cursor species group, results from many chromosomal fusions and therefore the syntenic associations observed probably represent synapomorphies. Our finding of a set of such associations revealed by H. megacephalus chromosome probes (6/21; 3/25; 11/16/17; and, 14/19) provides phylogenetic information for both tribes. An extension of these observations to other members of Akodontini and Oryzomyini tribes should improve our knowledge about chromosome evolution in both these groups.

Indexed as

Biological EvolutionPhylogenySyntenyAnimalsChromosome BandingChromosome PaintingDNA ProbesSigmodontinaeSouth AmericaSpecies SpecificityDNA Probes

Identifiers

PMID26642204
PMCPMC4671618
OpenAlexW2192479076

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.