Evidence map›Paper›PMID 26642053›Full record

ArticlePLoS neglected tropical diseases2015

The Schistosome Esophagus Is a 'Hotspot' for Microexon and Lysosomal Hydrolase Gene Expression: Implications for Blood Processing.

R Alan Wilson, Xiao Hong Li, Sandy MacDonald, Leandro Xavier Neves, Juliana Vitoriano-Souza, Luciana C C Leite, Leonardo P Farias, Sally James, Peter D Ashton, Ricardo DeMarco and 1 more

Open access · goldAbstract read
In one paragraph

Article in PLoS neglected tropical diseases, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
  2. Article
  3. RevisitingBiomolecules · 2023
    Article
  4. Review
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  6. Sex-Specific Modulation of the Host Transcriptome in the Spleen ofFrontiers in cellular and infection microbiology · 2022
    Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. The esophageal gland mediates host immune evasion by the human parasiteProceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 3 countries.

R Alan WilsonCentre for Immunology and Infection, Department of Biology, University of York, Heslington, York, United Kingdom.
Xiao Hong LiCentre for Immunology and Infection, Department of Biology, University of York, Heslington, York, United Kingdom.
Sandy MacDonaldGenomics and Bioinformatics Laboratory, Department of Biology, University of York, Heslington, York, United Kingdom.
Leandro Xavier NevesGenomics and Bioinformatics Laboratory, Department of Biology, University of York, Heslington, York, United Kingdom.
Juliana Vitoriano-SouzaCentro de Biotecnologia, Instituto Butantan, São Paulo, Brazil.
Luciana C C LeiteCentro de Biotecnologia, Instituto Butantan, São Paulo, Brazil.
Leonardo P FariasCentro de Biotecnologia, Instituto Butantan, São Paulo, Brazil.
Sally JamesGenomics and Bioinformatics Laboratory, Department of Biology, University of York, Heslington, York, United Kingdom.
Peter D AshtonGenomics and Bioinformatics Laboratory, Department of Biology, University of York, Heslington, York, United Kingdom.
Ricardo DeMarcoInstituto de Física de São Carlos, Universidade de São Paulo, Sao Carlos, Brasil.
William Castro BorgesGenomics and Bioinformatics Laboratory, Department of Biology, University of York, Heslington, York, United Kingdom.
University of York · GBInstituto Butantan · BRFundação Oswaldo Cruz · BRGenomics (United Kingdom) · GBUniversidade de São Paulo · BR

Funding

Wellcome Trust
6 · The paper itself

Abstract

backgroundThe schistosome esophagus is divided into anterior and posterior compartments, each surrounded by a dense cluster of gland cell bodies, the source of distinct secretory vesicles discharged into the lumen to initiate the processing of ingested blood. Erythrocytes are lysed in the lumen, leucocytes are tethered and killed and platelets are eliminated. We know little about the proteins secreted from the two glands that mediate these biological processes. METHODOLOGY/PRINCIPAL

findingsWe have used subtractive RNA-Seq to characterise the complement of genes that are differentially expressed in a head preparation, compared to matched tissues from worm tails. The expression site of representative highlighted genes was then validated using whole munt in situ hybridisation (WISH). Mapping of transcript reads to the S. mansoni genome assembly using Cufflinks identified ~90 genes that were differentially expressed >fourfold in the head preparation; ~50 novel transcripts were also identified by de novo assembly using Trinity. The largest subset (27) of secreted proteins was encoded by microexon genes (MEGs), the most intense focus identified to date. Expression of three (MEGs 12, 16, 17) was confirmed in the anterior gland and five (MEGs 8.1, 9, 11, 15 and 22) in the posterior gland. The other major subset comprised nine lysosomal hydrolases (aspartyl proteases, phospholipases and palmitoyl thioesterase), again localised to the glands.

conclusionsA proportion of the MEG-encoded secretory proteins can be classified by their primary structure. We have suggested testable hypotheses about how they might function, in conjunction with the lysosomal hydrolases, to mediate the biological processes that occur in the esophagus lumen. Antibodies bind to the esophageal secretions in both permissive and self-curing hosts, suggesting that the proteins represent a novel panel of untested vaccine candidates. A second major task is to identify which of them can serve as immune targets.

Indexed as

Gene Expression ProfilingAnimalsEsophagusFemaleHelminth ProteinsHydrolasesIn Situ HybridizationMaleMice, Inbred BALB CSchistosomaHelminth ProteinsHydrolases

Identifiers

PMID26642053
PMCPMC4671649
OpenAlexW2195289381

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.