Evidence map›Paper›PMID 26641934›Full record

ArticleNature chemical biology2016

'Deadman' and 'Passcode' microbial kill switches for bacterial containment.

Clement T Y Chan, Jeong Wook Lee, D Ewen Cameron, Caleb J Bashor, James J Collins

Abstract read
In one paragraph

Article in Nature chemical biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 189 papers.

0numbers the graph read from it
0cells of the map it votes in
189citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

189 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Review
  5. Review
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Review
  12. The dual role of the microbiome in chronic wound management.Cell communication and signaling : CCS · 2026
    Review
  13. Article
  14. Review
  15. Review
  16. Article
  17. Reprogrammed SimCells for antimicrobial therapy.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  18. Programming Next-Generation Synthetic Biosensors by Genetic Circuit Design.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Review
  19. Article
  20. Article

129 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Clement T Y ChanInstitute for Medical Engineering &Science, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.ORCID http://orcid.org/0000-0001-7940-3459
Jeong Wook LeeInstitute for Medical Engineering &Science, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.ORCID http://orcid.org/0000-0003-0705-0177
D Ewen CameronInstitute for Medical Engineering &Science, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.
Caleb J BashorInstitute for Medical Engineering &Science, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.
James J CollinsInstitute for Medical Engineering &Science, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.

Funding

Howard Hughes Medical Institute
6 · The paper itself

Abstract

Biocontainment systems that couple environmental sensing with circuit-based control of cell viability could be used to prevent escape of genetically modified microbes into the environment. Here we present two engineered safeguard systems known as the 'Deadman' and 'Passcode' kill switches. The Deadman kill switch uses unbalanced reciprocal transcriptional repression to couple a specific input signal with cell survival. The Passcode kill switch uses a similar two-layered transcription design and incorporates hybrid LacI-GalR family transcription factors to provide diverse and complex environmental inputs to control circuit function. These synthetic gene circuits efficiently kill Escherichia coli and can be readily reprogrammed to change their environmental inputs, regulatory architecture and killing mechanism.

Indexed as

Gene Expression Regulation, BacterialBacteriaBacterial ToxinsContainment of BiohazardsEscherichia coliFlow CytometryMutationOrganisms, Genetically ModifiedBacterial Toxins

Identifiers

PMID26641934
PMCPMC4718764

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.