Evidence map›Paper›PMID 26639779›Full record

ReviewNature reviews. Microbiology2016

Mechanistic insights into bacterial AAA+ proteases and protein-remodelling machines.

Adrian O Olivares, Tania A Baker, Robert T Sauer

Abstract readReview
In one paragraph

Review in Nature reviews. Microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 180 papers.

0numbers the graph read from it
0cells of the map it votes in
180citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

180 citing papers in PubMed.

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120 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Adrian O OlivaresDepartment of Biology, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA.
Tania A BakerDepartment of Biology, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA.
Robert T SauerDepartment of Biology, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA.

Funding

REPRESSOR &ANTIREPRESSOR PROTEINS OF BACTERIOPHAGER01AI016892 · NIAID · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI BAKER, TANIA A, SAUER, ROBERT T · 1985 to 2022
$13.0M
Protein Recognition for Remodeling and Degradation by Bacterial AAA+ ATPasesR01GM049224 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI BAKER, TANIA A · 1993 to 2013
$4.0M
Sequence Determinants of Protein Structure and StabilityR01GM101988 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI SAUER, ROBERT T · 2012 to 2019
$3.5M
Howard Hughes Medical InstituteNIAID NIH HHS AI‑16892NIAID NIH HHS R01 AI016892NIGMS NIH HHS GM‑101988NIGMS NIH HHS GM‑49224NIGMS NIH HHS R01 GM049224NIGMS NIH HHS R01 GM101988
6 · The paper itself

Abstract

To maintain protein homeostasis, AAA+ proteolytic machines degrade damaged and unneeded proteins in bacteria, archaea and eukaryotes. This process involves the ATP-dependent unfolding of a target protein and its subsequent translocation into a self-compartmentalized proteolytic chamber. Related AAA+ enzymes also disaggregate and remodel proteins. Recent structural and biochemical studies, in combination with direct visualization of unfolding and translocation in single-molecule experiments, have illuminated the molecular mechanisms behind these processes and suggest how remodelling of macromolecular complexes by AAA+ enzymes could occur without global denaturation. In this Review, we discuss the structural and mechanistic features of AAA+ proteases and remodelling machines, focusing on the bacterial ClpXP and ClpX as paradigms. We also consider the potential of these enzymes as antibacterial targets and outline future challenges for the field.

Indexed as

Adenosine TriphosphateBacteriaEndopeptidase ClpMacromolecular SubstancesModels, BiologicalModels, MolecularProtein FoldingProteolysisAdenosine TriphosphateEndopeptidase ClpMacromolecular Substances

Identifiers

PMID26639779
PMCPMC5458636

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.