Evidence map›Paper›PMID 26635870›Full record

ArticleFrontiers in genetics2015

Genome-Wide Screening of mRNA Expression in Leprosy Patients.

Andrea de Faria F Belone, Patrícia S Rosa, Ana P F Trombone, Luciana R V Fachin, Cássio C Guidella, Somei Ura, Jaison A Barreto, Mabel G Pinilla, Alex F de Carvalho, Dirce M Carraro and 2 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Human macrophage polarization in the response toCurrent research in microbial sciences · 2021
    Article
  7. Article
  8. Article
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  11. Article
  12. Review
  13. Article
  14. Human genetics of mycobacterial disease.Mammalian genome : official journal of the International Mammalian Genome Society · 2018
    Review
  15. Article
  16. Innate Immune Responses in Leprosy.Frontiers in immunology · 2018
    Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Andrea de Faria F BeloneDepartment of Anatomic Pathology, Instituto Lauro de Souza Lima São Paulo, Brazil ; Department of Anatomic Pathology, A.C. Camargo Cancer Center São Paulo, Brazil.
Patrícia S RosaDivision of Research and Education, Instituto Lauro de Souza Lima São Paulo, Brazil.
Ana P F TromboneDepartment of Health Science, Universidade do Sagrado Coração São Paulo, Brazil.
Luciana R V FachinDepartment of Anatomic Pathology, Instituto Lauro de Souza Lima São Paulo, Brazil.
Cássio C GuidellaAmbulatory of Leprosy, Jardim Guanabara Health Center Rondonópolis, Brazil.
Somei UraDivision of Research and Education, Instituto Lauro de Souza Lima São Paulo, Brazil.
Jaison A BarretoDivision of Dermathology, Instituto Lauro de Souza Lima São Paulo, Brazil.
Mabel G PinillaLaboratory of Genomics and Molecular Biology, CIPE, A.C. Camargo Cancer Center Sao Paulo, Brazil.
Alex F de CarvalhoLaboratory of Genomics and Molecular Biology, CIPE, A.C. Camargo Cancer Center Sao Paulo, Brazil.
Dirce M CarraroLaboratory of Genomics and Molecular Biology, CIPE, A.C. Camargo Cancer Center Sao Paulo, Brazil.
Fernando A SoaresDepartment of Anatomic Pathology, A.C. Camargo Cancer Center São Paulo, Brazil.
Cleverson T SoaresDepartment of Anatomic Pathology, Instituto Lauro de Souza Lima São Paulo, Brazil.
AC Camargo Hospital · BRInstituto Lauro de Souza Lima · BRKantar Health (Brazil) · BRUniversidade Sagrado Coração · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Leprosy, an infectious disease caused by Mycobacterium leprae, affects millions of people worldwide. However, little is known regarding its molecular pathophysiological mechanisms. In this study, a comprehensive assessment of human mRNA was performed on leprosy skin lesions by using DNA chip microarrays, which included the entire spectrum of the disease along with its reactional states. Sixty-six samples from leprotic lesions (10TT, 10BT, 10BB, 10BL, 4LL, 14R1, and 10R2) and nine skin biopsies from healthy individuals were used as controls (CC) (ages ranged from 06 to 83 years, 48 were male and 29 female). The evaluation identified 1580 differentially expressed mRNAs [Fold Change (FC) ≥ 2.0, p ≤ 0.05] in diseased lesions vs. healthy controls. Some of these genes were observed in all forms of the disease (CD2, CD27, chit1, FA2H, FAM26F, GZMB, MMP9, SLAMF7, UBD) and others were exclusive to reactional forms (Type "1" reaction: GPNMB, IL1B, MICAL2, FOXQ1; Type "2" reaction: AKR1B10, FAM180B, FOXQ1, NNMT, NR1D1, PTX3, TNFRSF25). In literature, these mRNAs have been associated with numerous pathophysiological processes and signaling pathways and are present in a large number of diseases. The role of these mRNAs maybe studied in the context of developing new diagnostic markers and therapeutic targets for leprosy.

Indexed as

immunohistochemistryleprosymicroarraymRNAsignaling pathways

Identifiers

PMID26635870
PMCPMC4653304
OpenAlexW2181388331

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.