Evidence map›Paper›PMID 26634353›Full record

ArticleEuropean journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology2016

Clonal relationship between human and avian ciprofloxacin-resistant Escherichia coli isolates in North-Eastern Algeria.

A Agabou, N Lezzar, Z Ouchenane, S Khemissi, D Satta, A Sotto, J-P Lavigne, A Pantel

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Article in European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 4 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 4 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Plasmid-mediated quinolone resistance in Enterobacteriaceae: a systematic review with a focus on Mediterranean countries.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2017
    Pooled it
  5. Review
  6. Antimicrobial Resistance in SelectedAntibiotics (Basel, Switzerland) · 2025
    Review
  7. Transmission ofEmerging microbes & infections · 2024
    Article
  8. Article
  9. Comparison of Antimicrobial Resistance among CommensalAntibiotics (Basel, Switzerland) · 2023
    Article
  10. Article
  11. Article
  12. Risk Factors and Prevalence ofFrontiers in microbiology · 2021
    Article
  13. Article
  14. Article
  15. Article
  16. Characteristics of Quinolone Resistance inFrontiers in microbiology · 2016
    Article
4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

8 authors.

A AgabouInstitut National de la Santé et de la Recherche Médicale, U1047, Université Montpellier, Nîmes, France.
N LezzarLaboratoire PADESCA, Institut des Sciences Vétérinaires, Université des frères Mentouri, Constantine, Algeria.
Z OuchenaneLaboratoire de Microbiologie, Hôpital Militaire Régional Universitaire de Constantine, Constantine, Algeria.
S KhemissiLaboratoire de Microbiologie, Hôpital Militaire Régional Universitaire de Constantine, Constantine, Algeria.
D SattaLaboratoire de Biologie Moléculaire et Cellulaire, Département de Biologie Animale, Faculté des Sciences de la Nature et de la vie, Université des Frères Mentouri, Constantine, Algeria.
A SottoInstitut National de la Santé et de la Recherche Médicale, U1047, Université Montpellier, Nîmes, France.
J-P LavigneInstitut National de la Santé et de la Recherche Médicale, U1047, Université Montpellier, Nîmes, France. jphlavigne@hotmail.com.
A PantelInstitut National de la Santé et de la Recherche Médicale, U1047, Université Montpellier, Nîmes, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The objectives of this study were to determine rates, patterns, and mechanisms of antibiotic resistance, and to assess connections between chicken commensal, human commensal, and pathogenic ciprofloxacin-resistant Escherichia coli isolates. All E. coli isolates collected from chickens, their farmers, and patients in the Constantine region (North-east Algeria) were analyzed for bla and plasmid-mediated quinolone resistance (PMQR) gene contents, phylogroups, Rep-PCR profiles, and multilocus sequence types. A high prevalence of resistance to fluoroquinolones (51.4 % to ciprofloxacin) was recorded in avian isolates. Of these, 22.2 % carried the aac(6')-Ib-cr gene, whereas lower resistance levels to these antibiotics were recorded in chicken farmers' isolates. None of the commensal isolates harbored the qnr, qepA, or oqxAB genes. One human pathogenic isolate was ertapenem-resistant and harbored the bla OXA-48 gene, 84 showed an extended-spectrum β-lactamase phenotype, with bla CTX-M-15 gene prevalent in 87.2 % of them. Seventy isolates were resistant to fluoroquinolones, with aac(6')-Ib-cr present in 72.8 %, qnrB in 5.7 %, and qnrS in 10 %. Three Rep-PCR profiles were common to chicken commensal and human pathogenic isolates (phylogroups D and B1; ST21, ST48, and ST471 respectively); one was found in both chicken and chicken-farmer commensal strains (D; ST108), while another profile was identified in a chicken-farmer commensal strain and a human pathogenic one (B1; ST19). These findings suggest clonal and epidemiologic links between chicken and human ciprofloxacin-resistant E. coli isolates and the important role that poultry may play in the epidemiology of human E. coli infections in the Constantine region.

Indexed as

AlgeriaAnimalsbeta-LactamasesChickensCiprofloxacinDNA, BacterialDrug Resistance, Multiple, BacterialEscherichia coliEscherichia coli InfectionsFarmersHumansMicrobial Sensitivity TestsMultilocus Sequence TypingSymbiosisbeta-LactamasesCiprofloxacinDNA, Bacterial

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.