Evidence map›Paper›PMID 26634277›Full record

ArticleThe Journal of biological chemistry2016

Regulation of Sphingolipid Biosynthesis by the Morphogenesis Checkpoint Kinase Swe1.

Neha Chauhan, Gongshe Han, Niranjanakumari Somashekarappa, Kenneth Gable, Teresa Dunn, Sepp D Kohlwein

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 28 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Regulation of sphingolipid synthesis by the G1/S transcription factor Swi4.Biochimica et biophysica acta. Molecular and cell biology of lipids · 2021
    Article
  12. Yeast Sphingolipid Phospholipase GeneMolecular and cellular biology · 2020
    Article
  13. Sphingolipid biosynthesis in man and microbes.Natural product reports · 2018
    Review
  14. Article
  15. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Neha ChauhanFrom the Institute of Molecular Biosciences, BioTechMed-Graz, University of Graz, Humboldtstrasse 50/II, 8010 Graz, Austria and.
Gongshe Hanthe Department of Biochemistry, Uniformed Services University of the Health Sciences, Bethesda, Maryland 20814.
Niranjanakumari Somashekarappathe Department of Biochemistry, Uniformed Services University of the Health Sciences, Bethesda, Maryland 20814.
Kenneth Gablethe Department of Biochemistry, Uniformed Services University of the Health Sciences, Bethesda, Maryland 20814.
Teresa Dunnthe Department of Biochemistry, Uniformed Services University of the Health Sciences, Bethesda, Maryland 20814 teresa.dunn-giroux@usuhs.edu.
Sepp D KohlweinFrom the Institute of Molecular Biosciences, BioTechMed-Graz, University of Graz, Humboldtstrasse 50/II, 8010 Graz, Austria and sepp.kohlwein@uni-graz.at.
Uniformed Services University of the Health Sciences · USBioTechMed-Graz · ATUniversity of Graz · AT

Funding

ORM Protein Regulation of Sphingolipid Biosynthesis in Yeast and MammalsR21HD080181 · NICHD · HENRY M. JACKSON FDN FOR THE ADV MIL/MED · PI DUNN, TERESA M · 2014 to 2015
$423k
NICHD NIH HHS R21 HD080181NICHD NIH HHS R21HD080181
6 · The paper itself

Abstract

Sphingolipid (SL) biosynthesis is negatively regulated by the highly conserved endoplasmic reticulum-localized Orm family proteins. Defective SL synthesis in Saccharomyces cerevisiae leads to increased phosphorylation and inhibition of Orm proteins by the kinase Ypk1. Here we present evidence that the yeast morphogenesis checkpoint kinase, Swe1, regulates SL biosynthesis independent of the Ypk1 pathway. Deletion of the Swe1 kinase renders mutant cells sensitive to serine palmitoyltransferase inhibition due to impaired sphingoid long-chain base synthesis. Based on these data and previous results, we suggest that Swe1 kinase perceives alterations in SL homeostasis, activates SL synthesis, and may thus represent the missing regulatory link that controls the SL rheostat during the cell cycle.

Indexed as

Gene Expression Regulation, FungalCell Cycle ProteinsCell DivisionFatty Acids, MonounsaturatedGlutathione TransferaseGlycogen Synthase Kinase 3HomeostasisMutationPhosphorylationProtein-Tyrosine KinasesSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSerine C-PalmitoyltransferaseSphingolipidsCell Cycle ProteinsFatty Acids, MonounsaturatedGlutathione TransferaseGlycogen Synthase Kinase 3MCK1 protein, S cerevisiaeOrm2 protein, S cerevisiaeProtein-Tyrosine KinasesSaccharomyces cerevisiae ProteinsSerine C-PalmitoyltransferaseSphingolipidsSWE1 protein, S cerevisiaethermozymocidincell cyclemetabolic regulationphosphorylationserine palmitoyltransferasesphingolipidyeast

Identifiers

PMID26634277
PMCPMC4732232
OpenAlexW2183857587

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.