Evidence map›Paper›PMID 26633894›Full record

ArticlePloS one2015

The Role of ARX in Human Pancreatic Endocrine Specification.

Blair K Gage, Ali Asadi, Robert K Baker, Travis D Webber, Rennian Wang, Masayuki Itoh, Masaharu Hayashi, Rie Miyata, Takumi Akashi, Timothy J Kieffer

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed, 1 pooled it
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 1 synthesis or guideline pooled it, 47 citations in OpenAlex.

  1. Pooled it
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  15. NovelHuman genome variation · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Blair K GageDepartment of Cellular and Physiological Sciences, University of British Columbia, Vancouver, British Columbia, Canada.
Ali AsadiDepartment of Cellular and Physiological Sciences, University of British Columbia, Vancouver, British Columbia, Canada.
Robert K BakerDepartment of Cellular and Physiological Sciences, University of British Columbia, Vancouver, British Columbia, Canada.
Travis D WebberDepartment of Cellular and Physiological Sciences, University of British Columbia, Vancouver, British Columbia, Canada.
Rennian WangDepartments of Physiology, Pharmacology & Medicine, Child Health Research Institute, the University of Western Ontario, London, Ontario, Canada.
Masayuki ItohNational Center of Neurology and Psychiatry, Tokyo, Japan.
Masaharu HayashiTokyo Metropolitan Institute of Medical Science, Tokyo, Japan.
Rie MiyataTokyo Metropolitan Institute of Medical Science, Tokyo, Japan.
Takumi AkashiTokyo Medical and Dental University, Tokyo, Japan.
Timothy J KiefferDepartment of Cellular and Physiological Sciences, University of British Columbia, Vancouver, British Columbia, Canada.
University of British Columbia · CATokyo Metropolitan Institute of Medical Science · JPNational Center of Neurology and Psychiatry · JPTokyo Medical and Dental University · JPWestern University · CA

Funding

Canadian Institutes of Health Research
6 · The paper itself

Abstract

The in vitro differentiation of human embryonic stem cells (hESCs) offers a model system to explore human development. Humans with mutations in the transcription factor Aristaless Related Homeobox (ARX) often suffer from the syndrome X-linked lissencephaly with ambiguous genitalia (XLAG), affecting many cell types including those of the pancreas. Indeed, XLAG pancreatic islets lack glucagon and pancreatic polypeptide-positive cells but retain somatostatin, insulin, and ghrelin-positive cells. To further examine the role of ARX in human pancreatic endocrine development, we utilized genomic editing in hESCs to generate deletions in ARX. ARX knockout hESCs retained pancreatic differentiation capacity and ARX knockout endocrine cells were biased toward somatostatin-positive cells (94% of endocrine cells) with reduced pancreatic polypeptide (rarely detected), glucagon (90% reduced) and insulin-positive (65% reduced) lineages. ARX knockout somatostatin-positive cells shared expression patterns with human fetal and adult δ-cells. Differentiated ARX knockout cells upregulated PAX4, NKX2.2, ISL1, HHEX, PCSK1, PCSK2 expression while downregulating PAX6 and IRX2. Re-expression of ARX in ARX knockout pancreatic progenitors reduced HHEX and increased PAX6 and insulin expression following differentiation. Taken together these data suggest that ARX plays a key role in pancreatic endocrine fate specification of pancreatic polypeptide, somatostatin, glucagon and insulin positive cells from hESCs.

Indexed as

Cell DifferentiationCell LineCell LineageGlucagonHomeobox Protein Nkx-2.2Homeodomain ProteinsHumansInsulinIslets of LangerhansNuclear ProteinsPaired Box Transcription FactorsPancreatic PolypeptideSomatostatinTranscription FactorsARX protein, humanGlucagonHomeobox Protein Nkx-2.2Homeodomain ProteinsInsulinNKX2-2 protein, humanNuclear ProteinsPaired Box Transcription FactorsPancreatic PolypeptidePAX4 protein, humanSomatostatinTranscription Factors

Identifiers

PMID26633894
PMCPMC4669132
OpenAlexW2185664099

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.