Evidence map›Paper›PMID 26633812›Full record

ArticleeLife2015

An extracellular biochemical screen reveals that FLRTs and Unc5s mediate neuronal subtype recognition in the retina.

Jasper J Visser, Yolanda Cheng, Steven C Perry, Andrew Benjamin Chastain, Bayan Parsa, Shatha S Masri, Thomas A Ray, Jeremy N Kay, Woj M Wojtowicz

Open access · goldAbstract read
In one paragraph

Article in eLife, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 60 citations in OpenAlex.

  1. Article
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  6. Review
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  8. Differential Expression Analysis Identifies Candidate Synaptogenic Molecules for Wiring Direction-Selective Circuits in the Retina.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2024
    Article
  9. Article
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  16. Adhesion GPCR Latrophilin 3 regulates synaptic function of cone photoreceptors in a trans-synaptic manner.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  17. Article
  18. Synaptic recognition molecules in development and disease.Current topics in developmental biology · 2021
    Article
  19. Molecular mechanisms regulating synaptic specificity and retinal circuit formation.Wiley interdisciplinary reviews. Developmental biology · 2021
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Jasper J VisserDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, United States.
Yolanda ChengDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, United States.
Steven C PerryDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, United States.
Andrew Benjamin ChastainDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, United States.
Bayan ParsaDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, United States.
Shatha S MasriDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, United States.
Thomas A RayDepartment of Neurobiology, Duke University School of Medicine, Durham, United States.
Jeremy N KayDepartment of Neurobiology, Duke University School of Medicine, Durham, United States.
Woj M WojtowiczDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, United States.
University of California, Berkeley · USDuke University · US

Funding

VISION RESEARCHP30EY005722 · NEI · DUKE UNIVERSITY · PI Vadim Y Arshavsky · 1985 to 2026
$19.3M
Molecular control of neuronal position during retinal developmentR01EY024694 · NEI · DUKE UNIVERSITY · PI KAY, JEREMY N · 2014 to 2018
$2.0M
NEI NIH HHS 1R01EY024694NEI NIH HHS P30 EY005722NEI NIH HHS R01 EY024694
6 · The paper itself

Abstract

In the inner plexiform layer (IPL) of the mouse retina, ~70 neuronal subtypes organize their neurites into an intricate laminar structure that underlies visual processing. To find recognition proteins involved in lamination, we utilized microarray data from 13 subtypes to identify differentially-expressed extracellular proteins and performed a high-throughput biochemical screen. We identified ~50 previously-unknown receptor-ligand pairs, including new interactions among members of the FLRT and Unc5 families. These proteins show laminar-restricted IPL localization and induce attraction and/or repulsion of retinal neurites in culture, placing them in an ideal position to mediate laminar targeting. Consistent with a repulsive role in arbor lamination, we observed complementary expression patterns for one interaction pair, FLRT2-Unc5C, in vivo. Starburst amacrine cells and their synaptic partners, ON-OFF direction-selective ganglion cells, express FLRT2 and are repelled by Unc5C. These data suggest a single molecular mechanism may have been co-opted by synaptic partners to ensure joint laminar restriction.

Indexed as

Cell CommunicationAnimalsBiochemistryGene Expression ProfilingMembrane GlycoproteinsMiceMicroarray AnalysisNetrin ReceptorsNeuronsProtein BindingProtein Interaction MappingProteomeReceptors, Cell SurfaceRetinaMembrane GlycoproteinsNetrin ReceptorsProteomeReceptors, Cell Surfaceaxon guidancebiochemistryinner plexiform layerlaminar organizationmouseneurosciencereceptor-ligand interactionsretinastarburst amacrine cells

Identifiers

PMID26633812
PMCPMC4737655
OpenAlexW2191037482

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.