Evidence map›Paper›PMID 26633363›Full record

ArticleInternational journal of molecular sciences2015

Gene Expression Profiles of Main Olfactory Epithelium in Adenylyl Cyclase 3 Knockout Mice.

Zhenshan Wang, Yanfen Zhou, Yingtao Luo, Jing Zhang, Yunpeng Zhai, Dong Yang, Zhe Zhang, Yongchao Li, Daniel R Storm, Runlin Z Ma

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.3field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Zhenshan WangCollege of Life Science, Hebei University, Baoding 071002, China. zswang@hbu.edu.cn.
Yanfen ZhouCollege of Life Science, Hebei University, Baoding 071002, China. zhou66913@163.com.
Yingtao LuoCollege of Life Science, Hebei University, Baoding 071002, China. luoyingtao1987@sina.com.
Jing ZhangCollege of Life Science, Hebei University, Baoding 071002, China. zhangjing_0521@sohu.com.
Yunpeng ZhaiCollege of Life Science, Hebei University, Baoding 071002, China. zypkid1412@sina.com.
Dong YangCollege of Life Science, Hebei University, Baoding 071002, China. yangdong87@yahoo.com.
Zhe ZhangCollege of Life Science, Hebei University, Baoding 071002, China. zhangzhe_2005@126.com.
Yongchao LiInstitute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China. liyongchao@genetics.ac.cn.
Daniel R StormDepartment of Pharmacology, University of Washington, Seattle, WA 98195, USA. dstorm@u.washington.edu.
Runlin Z MaInstitute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China. rlma@genetics.ac.cn.
Hebei University · CNInstitute of Genetics and Developmental Biology · CNUniversity of Washington · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Adenylyl Cyclase 3 (AC3) plays an important role in the olfactory sensation-signaling pathway in mice. AC3 deficiency leads to defects in olfaction. However, it is still unknown whether AC3 deficiency affects gene expression or olfactory signal transduction pathways within the main olfactory epithelium (MOE). In this study, gene microarrays were used to screen differentially expressed genes in MOE from AC3 knockout (AC3(-/-)) and wild-type (AC3(+/+)) mice. The differentially expressed genes identified were subjected to bioinformatic analysis and verified by qRT-PCR. Gene expression in the MOE from AC3(-/-) mice was significantly altered, compared to AC3(+/+) mice. Of the 41266 gene probes, 3379 had greater than 2-fold fold change in expression levels between AC3(-/-) and AC3(+/+) mice, accounting for 8% of the total gene probes. Of these genes, 1391 were up regulated, and 1988 were down regulated, including 425 olfactory receptor genes, 99 genes that are specifically expressed in the immature olfactory neurons, 305 genes that are specifically expressed in the mature olfactory neurons, and 155 genes that are involved in epigenetic regulation. Quantitative RT-PCR verification of the differentially expressed epigenetic regulation related genes, olfactory receptors, ion transporter related genes, neuron development and differentiation related genes, lipid metabolism and membrane protein transport etc. related genes showed that P75NTR, Hinfp, Gadd45b, and Tet3 were significantly up-regulated, while Olfr370, Olfr1414, Olfr1208, Golf, Faim2, Tsg101, Mapk10, Actl6b, H2BE, ATF5, Kirrrel2, OMP, Drd2 etc. were significantly down-regulated. In summary, AC3 may play a role in proximal olfactory signaling and play a role in the regulation of differentially expressed genes in mouse MOE.

Indexed as

TranscriptomeAdenylyl CyclasesAnimalsApoptosisCell ProliferationComputational BiologyCyclic AMPEpigenesis, GeneticGene Expression ProfilingGene Expression RegulationGene OntologyMiceMice, KnockoutMolecular Sequence AnnotationOlfactory MucosaOlfactory Receptor NeuronsAdenylyl CyclasesCyclic AMPadenylyl cyclase 3differentially expressed genesmain olfactory epitheliummicroarray analysis

Identifiers

PMID26633363
PMCPMC4691054
OpenAlexW2175089090

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.