Evidence map›Paper›PMID 26633359›Full record

ArticleInternational journal of molecular sciences2015

Characterization of Aspartate Kinase from Corynebacterium pekinense and the Critical Site of Arg169.

Weihong Min, Huiying Li, Hongmei Li, Chunlei Liu, Jingsheng Liu

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Discovery ofFrontiers in cellular and infection microbiology · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Weihong MinCollege of Food Science and Engineering, Jilin Agricultural University, Changchun 130118, China. minwh2000@jlau.edu.cn.
Huiying LiCollege of Food Science and Engineering, Jilin Agricultural University, Changchun 130118, China. lihuiying@jlau.edu.cn.
Hongmei LiCollege of Food Science and Engineering, Jilin Agricultural University, Changchun 130118, China. lihongmei@jlau.edu.cn.
Chunlei LiuCollege of Food Science and Engineering, Jilin Agricultural University, Changchun 130118, China. liuchunlei0709@jlau.edu.cn.
Jingsheng LiuCollege of Food Science and Engineering, Jilin Agricultural University, Changchun 130118, China. liujs2000@jlau.edu.cn.
National Engineering Research Center for Wheat · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aspartate kinase (AK) is the key enzyme in the biosynthesis of aspartate-derived amino acids. Recombinant AK was efficiently purified and systematically characterized through analysis under optimal conditions combined with steady-state kinetics study. Homogeneous AK was predicted as a decamer with a molecular weight of ~48 kDa and a half-life of 4.5 h. The enzymatic activity was enhanced by ethanol and Ni(2+). Moreover, steady-state kinetic study confirmed that AK is an allosteric enzyme, and its activity was inhibited by allosteric inhibitors, such as Lys, Met, and Thr. Theoretical results indicated the binding mode of AK and showed that Arg169 is an important residue in substrate binding, catalytic domain, and inhibitor binding. The values of the kinetic parameter Vmax of R169 mutants, namely, R169Y, R169P, R169D, and R169H AK, with l-aspartate as the substrate, were 4.71-, 2.25-, 2.57-, and 2.13-fold higher, respectively, than that of the wild-type AK. Furthermore, experimental and theoretical data showed that Arg169 formed a hydrogen bond with Glu92, which functions as the entrance gate. This study provides a basis to develop new enzymes and elucidate the corresponding amino acid production.

Indexed as

Catalytic DomainModels, MolecularProtein ConformationAmino Acid SequenceAspartate KinaseBinding SitesCorynebacteriumEnzyme InhibitorsMolecular Sequence DataMutationRecombinant ProteinsSequence AlignmentSolventsThermodynamicsAspartate KinaseEnzyme InhibitorsRecombinant ProteinsSolventsaspartate kinasecharacterizationCorynebacterium pekinensemolecular docking

Identifiers

PMID26633359
PMCPMC4691045
OpenAlexW2176059279

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.