Evidence map›Paper›PMID 26631734›Full record

ArticleThe Journal of biological chemistry2016

Novel Structural Components Contribute to the High Thermal Stability of Acyl Carrier Protein from Enterococcus faecalis.

Young-Guen Park, Min-Cheol Jung, Heesang Song, Ki-Woong Jeong, Eunjung Bang, Geum-Sook Hwang, Yangmee Kim

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Important Features for Protein Foldings in Two Acyl Carrier Proteins fromJournal of microbiology and biotechnology · 2024
    Article
  3. Article
  4. Deciphering the Binding Interactions betweenInternational journal of molecular sciences · 2021
    Article
  5. Structural Characterization of an ACP fromInternational journal of molecular sciences · 2020
    Article
  6. mBio · 2019
    Article
  7. Disulfide Bond Engineering of an Endoglucanase fromInternational journal of molecular sciences · 2019
    Article
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Young-Guen ParkFrom the Department of Bioscience and Biotechnology and the Bio/Molecular Informatics Center Konkuk University, Seoul 143-701, Korea and.
Min-Cheol JungFrom the Department of Bioscience and Biotechnology and the Bio/Molecular Informatics Center Konkuk University, Seoul 143-701, Korea and.
Heesang SongFrom the Department of Bioscience and Biotechnology and the Bio/Molecular Informatics Center Konkuk University, Seoul 143-701, Korea and.
Ki-Woong JeongFrom the Department of Bioscience and Biotechnology and the Bio/Molecular Informatics Center Konkuk University, Seoul 143-701, Korea and.
Eunjung Bangthe Western Seoul Center, Korea Basic Science Institute, Seoul 120-140, Korea.
Geum-Sook Hwangthe Western Seoul Center, Korea Basic Science Institute, Seoul 120-140, Korea.
Yangmee KimFrom the Department of Bioscience and Biotechnology and the Bio/Molecular Informatics Center Konkuk University, Seoul 143-701, Korea and. Electronic address: ymkim@konkuk.ac.kr.
Konkuk University · KRKorea Basic Science Institute · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Enterococcus faecalis is a Gram-positive, commensal bacterium that lives in the gastrointestinal tracts of humans and other mammals. It causes severe infections because of high antibiotic resistance. E. faecalis can endure extremes of temperature and pH. Acyl carrier protein (ACP) is a key element in the biosynthesis of fatty acids responsible for acyl group shuttling and delivery. In this study, to understand the origin of high thermal stabilities of E. faecalis ACP (Ef-ACP), its solution structure was investigated for the first time. CD experiments showed that the melting temperature of Ef-ACP is 78.8 °C, which is much higher than that of Escherichia coli ACP (67.2 °C). The overall structure of Ef-ACP shows the common ACP folding pattern consisting of four α-helices (helix I (residues 3-17), helix II (residues 39-53), helix III (residues 60-64), and helix IV (residues 68-78)) connected by three loops. Unique Ef-ACP structural features include a hydrophobic interaction between Phe(45) in helix II and Phe(18) in the α1α2 loop and a hydrogen bonding between Ser(15) in helix I and Ile(20) in the α1α2 loop, resulting in its high thermal stability. Phe(45)-mediated hydrophobic packing may block acyl chain binding subpocket II entry. Furthermore, Ser(58) in the α2α3 loop in Ef-ACP, which usually constitutes a proline in other ACPs, exhibited slow conformational exchanges, resulting in the movement of the helix III outside the structure to accommodate a longer acyl chain in the acyl binding cavity. These results might provide insights into the development of antibiotics against pathogenic drug-resistant E. faecalis strains.

Indexed as

Acyl Carrier ProteinCrystallography, X-RayEnterococcus faecalisHot TemperatureHydrogen BondingModels, MolecularNuclear Magnetic Resonance, BiomolecularProtein StabilityProtein Structure, SecondaryAcyl Carrier Proteinacyl carrier protein (ACP)biophysicsEnterococcus faecalisfatty acid synthase (FAS)nuclear magnetic resonance (NMR)protein structure

Identifiers

PMID26631734
PMCPMC4722451
OpenAlexW2266908104

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.