Evidence map›Paper›PMID 26630576›Full record

Trial reportPloS one2015

High-Throughput Mutation Profiling Changes before and 3 Weeks after Chemotherapy in Newly Diagnosed Breast Cancer Patients.

Sing-Huang Tan, Nur Sabrina Sapari, Hui Miao, Mikael Hartman, Marie Loh, Wee-Joo Chng, Philip Iau, Shaik Ahmad Buhari, Richie Soong, Soo-Chin Lee

Registry-linked trialOpen access · goldAbstract readComparative StudyRandomized Controlled Trial
In one paragraph

Trial report in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT00212082 (Gene Expression Profiles of Breast Cancer Treated With Sequential Adriamycin and Docetaxel in Relation to Tumor Responses), which is not on this map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT00212082 phase2completednot on this map

Gene Expression Profiles of Breast Cancer Treated With Sequential Adriamycin and Docetaxel in Relation to Tumor Responses

TypeinterventionalSponsorNational University Hospital, SingaporeRan2002Enrolled100ConditionsMetastatic Breast CancerArmsdoxorubicin, docetaxel
3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 21 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. Article
  6. Chronic Lymphocytic Leukemia.Cold Spring Harbor perspectives in medicine · 2021
    Review
  7. Review
  8. Tumor Testing for Somatic and GermlineFrontiers in oncology · 2020
    Article
  9. Article
  10. Review
  11. Article
  12. Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Sing-Huang TanDepartment of Haematology-Oncology, National University Cancer Institute Singapore, National University Health System, Singapore, Singapore.
Nur Sabrina SapariCancer Science Institute of Singapore, National University of Singapore, Singapore, Singapore.
Hui MiaoSaw Swee Hock School of Public Health, National University of Singapore, Singapore, Singapore.
Mikael HartmanDepartment of Surgery, National University Cancer Institute Singapore, National University Health System, Singapore, Singapore.
Marie LohCancer Science Institute of Singapore, National University of Singapore, Singapore, Singapore.
Wee-Joo ChngDepartment of Haematology-Oncology, National University Cancer Institute Singapore, National University Health System, Singapore, Singapore.
Philip IauDepartment of Surgery, National University Cancer Institute Singapore, National University Health System, Singapore, Singapore.
Shaik Ahmad BuhariDepartment of Surgery, National University Cancer Institute Singapore, National University Health System, Singapore, Singapore.
Richie SoongCancer Science Institute of Singapore, National University of Singapore, Singapore, Singapore.
Soo-Chin LeeDepartment of Haematology-Oncology, National University Cancer Institute Singapore, National University Health System, Singapore, Singapore.
National University Health System · SGNational University Cancer Institute, Singapore · SGNational University of Singapore · SG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundChanges in tumor DNA mutation status during chemotherapy can provide insights into tumor biology and drug resistance. The purpose of this study is to analyse the presence or absence of mutations in cancer-related genes using baseline breast tumor samples and those obtained after exposure to one cycle of chemotherapy to determine if any differences exist, and to correlate these differences with clinical and pathological features.

methodsPaired breast tumor core biopsies obtained pre- and post-first cycle doxorubicin (n = 18) or docetaxel (n = 22) in treatment-naïve breast cancer patients were analysed for 238 mutations in 19 cancer-related genes by the Sequenom Oncocarta assay.

resultsMedian age of patients was 48 years (range 32-64); 55% had estrogen receptor-positive tumors, and 60% had tumor reduction ≥25% after cycle 1. Mutations were detected in 10/40 (25%) pre-treatment and 11/40 (28%) post-treatment samples. Four mutation pattern categories were identified based on tumor mutation status pre- → post-treatment: wildtype (WT)→WT, n = 24; mutant (MT)→MT, n = 5; MT→WT, n = 5; WT→MT, n = 6. Overall, the majority of tumors were WT at baseline (30/40, 75%), of which 6/30 (20%) acquired new mutations after chemotherapy. Pre-treatment mutations were predominantly in PIK3CA (8/10, 80%), while post-treatment mutations were distributed in PIK3CA, EGFR, PDGFRA, ABL1 and MET. All 6 WT→MT cases were treated with docetaxel. Higher mutant allele frequency in baseline MT tumors (n = 10; PIK3CA mutations n = 8) correlated with less tumor reduction after cycle 1 chemotherapy (R = -0.667, p = 0.035). No other associations were observed between mutation pattern category with treatment, clinicopathological features, and tumor response or survival.

conclusionTumor mutational profiles can change as quickly as after one cycle of chemotherapy in breast cancer. Understanding of these changes can provide insights on potential therapeutic options in residual resistant tumors.

trial registrationClinicalTrials.gov NCT00212082.

Indexed as

Neoadjuvant TherapyAdultAntineoplastic Combined Chemotherapy ProtocolsBiomarkers, TumorBreast NeoplasmsDNA Mutational AnalysisDocetaxelDoxorubicinErb-b2 Receptor Tyrosine KinasesFemaleHigh-Throughput Nucleotide SequencingHumansMiddle AgedMutationNeoplasm MetastasisPrognosisBiomarkers, TumorDocetaxelDoxorubicinErb-b2 Receptor Tyrosine KinasesReceptors, EstrogenReceptors, ProgesteroneTaxoids

Identifiers

PMID26630576
PMCPMC4667877
OpenAlexW2187547792

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.