Evidence map›Paper›PMID 26630357›Full record

ArticleJournal of the American Chemical Society2015

Understanding Programming of Fungal Iterative Polyketide Synthases: The Biochemical Basis for Regioselectivity by the Methyltransferase Domain in the Lovastatin Megasynthase.

Ralph A Cacho, Justin Thuss, Wei Xu, Randy Sanichar, Zhizeng Gao, Allison Nguyen, John C Vederas, Yi Tang

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
8.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 93 citations in OpenAlex.

  1. Article
  2. Substrate specificities of two ketosynthases in eukaryotic microalgal and prokaryotic marine bacterial DHA synthases.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  3. Article
  4. Review
  5. A genetic tool to express long fungal biosynthetic genes.Fungal biology and biotechnology · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Ralph A CachoDepartment of Chemical and Biomolecular Engineering, Department of Chemistry and Biochemistry, University of California , Los Angeles, California 90095, United States.
Justin ThussDepartment of Chemistry, University of Alberta , Edmonton, AB T6G 2G2, Canada.
Wei XuDepartment of Chemical and Biomolecular Engineering, Department of Chemistry and Biochemistry, University of California , Los Angeles, California 90095, United States.
Randy SanicharDepartment of Chemistry, University of Alberta , Edmonton, AB T6G 2G2, Canada.
Zhizeng GaoDepartment of Chemistry, University of Alberta , Edmonton, AB T6G 2G2, Canada.
Allison NguyenDepartment of Chemical and Biomolecular Engineering, Department of Chemistry and Biochemistry, University of California , Los Angeles, California 90095, United States.
John C VederasDepartment of Chemistry, University of Alberta , Edmonton, AB T6G 2G2, Canada.
Yi TangDepartment of Chemical and Biomolecular Engineering, Department of Chemistry and Biochemistry, University of California , Los Angeles, California 90095, United States.
University of Alberta · CAUniversity of California, Los Angeles · US

Funding

Rediscovering Natural Chemical Diversity -1DP1GM106413DP1GM106413 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI TANG, YI · 2012 to 2016
$3.9M
Characterization and Engineering of Fungal Megasynthases in Escherichia coliR01GM085128 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI TANG, YI · 2008 to 2016
$2.1M
NCCDPHP CDC HHS 1DP1GM106413NIGMS NIH HHS 1R01GM085128NIGMS NIH HHS DP1 GM106413NIGMS NIH HHS R01 GM085128
6 · The paper itself

Abstract

Highly reducing polyketide synthases (HR-PKSs) from fungi synthesize complex natural products using a single set of domains in a highly programmed, iterative fashion. The most enigmatic feature of HR-PKSs is how tailoring domains function selectively during different iterations of chain elongation to afford structural diversity. Using the lovastatin nonaketide synthase LovB as a model system and a variety of acyl substrates, we characterized the substrate specificity of the LovB methyltransferase (MT) domain. We showed that, while the MT domain displays methylation activity toward different β-ketoacyl groups, it is exceptionally selective toward its naturally programmed β-keto-dienyltetraketide substrate with respect to both chain length and functionalization. Accompanying characterization of the ketoreductase (KR) domain displays broader substrate specificity toward different β-ketoacyl groups. Our studies indicate that selective modifications by tailoring domains, such as the MTs, are achieved by higher kinetic efficiency on a particular substrate relative to the rate of transformation by other competing domains.

Indexed as

FungiLovastatinMethyltransferasesPolyketide SynthasesLovastatinMethyltransferasesPolyketide Synthases

Identifiers

PMID26630357
PMCPMC4906797
OpenAlexW2280489664

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.