Evidence map›Paper›PMID 26629823›Full record

ArticlePloS one2015

Non-Specific Blocking of miR-17-5p Guide Strand in Triple Negative Breast Cancer Cells by Amplifying Passenger Strand Activity.

Yuan-Yuan Jin, Jade Andrade, Eric Wickstrom

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Review
  6. MicroRNA delivery through nanoparticles.Journal of controlled release : official journal of the Controlled Release Society · 2019
    Review
  7. Article
  8. MiR-17-5p may serve as a novel predictor for breast cancer recurrence.Cancer biomarkers : section A of Disease markers · 2018
    Article
  9. Article
  10. Review
  11. Article
  12. Regulation of epithelial-mesenchymal transition through microRNAs: clinical and biological significance of microRNAs in breast cancer.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2016
    Review
  13. Inhibition of miR-21 rescues liver regeneration after partial hepatectomy in ethanol-fed rats.American journal of physiology. Gastrointestinal and liver physiology · 2016
    Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Yuan-Yuan JinBiochemistry & Molecular Biology, Thomas Jefferson University, Philadelphia, Pennsylvania, United States of America.
Jade AndradeChemistry, Haverford College, Haverford, Pennsylvania, United States of America.
Eric WickstromBiochemistry & Molecular Biology, Thomas Jefferson University, Philadelphia, Pennsylvania, United States of America.
Thomas Jefferson University · USHaverford College · US

Funding

PET Imaging of KRAS2 Activation to Guide EGFR Targeting in Cancer TherapyR01CA148565 · NCI · THOMAS JEFFERSON UNIVERSITY · PI MITCHELL, EDITH P., THAKUR, MATHEW LAXMAN · 2010 to 2013
$2.3M
NCI NIH HHS CA148565NCI NIH HHS R01 CA148565
6 · The paper itself

Abstract

Conventional wisdom holds that only one of the two strands in a micro ribonucleic acid (miRNA) precursor duplex is selected as the active miRNA guide strand. The complementary miRNA passenger strand, however, is thought to be inactive. High levels of the oncogenic miRNA (oncomiR) guide strand called miR-17-5p is overexpressed in triple negative breast cancer (TNBC) and can inhibit ribosomal translation of tumor suppressor gene mRNAs, such as programmed cell death 4 (PDCD4) or phosphatase and tensin homolog (PTEN). We hypothesized that knocking down the oncogenic microRNA (oncomiR) miR-17-5p might restore the expression levels of PDCD4 and PTEN tumor suppressor proteins, illustrating a route to oligonucleotide therapy of TNBC. Contrary to conventional wisdom, antisense knockdown of oncomiR miR-17-5p guide strand reduced PDCD4 and PTEN proteins by 1.8±0.3 fold in human TNBC cells instead of raising them. Bioinformatics analysis and folding energy calculations revealed that mRNA targets of miR-17-5p guide strand, such as PDCD4 and PTEN, could also be regulated by miR-17-3p passenger strand. Due to high sequence homology between the antisense molecules and miR-17-3p passenger strand, as well as the excess binding sites for the passenger strand on the 3'UTR of PDCD4 and PTEN mRNAs, introducing a miR-17-3p DNA-LNA mimic to knock down miR-17-5p reduced PDCD4 and PTEN protein expression instead of raising them. Our results imply that therapeutic antisense sequences against miRNAs should be designed to target the miRNA strand with the greatest number of putative binding sites in the target mRNAs, while minimizing affinity for the minor strand.

Indexed as

Gene Expression Regulation, NeoplasticApoptosis Regulatory ProteinsBlotting, WesternCell ProliferationFemaleHumansMicroRNAsMolecular Dynamics SimulationPTEN PhosphohydrolaseReal-Time Polymerase Chain ReactionRNA-Binding ProteinsRNA, MessengerTriple Negative Breast NeoplasmsApoptosis Regulatory ProteinsMicroRNAsMIRN17 microRNA, humanPDCD4 protein, humanPTEN PhosphohydrolasePTEN protein, humanRNA-Binding ProteinsRNA, Messenger

Identifiers

PMID26629823
PMCPMC4667903
OpenAlexW2189085448

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.