Evidence map›Paper›PMID 26628857›Full record

ArticleMolecular vision2015

Mutations in GRM6 identified in consanguineous Pakistani families with congenital stationary night blindness.

Muhammad Asif Naeem, Alexander D H Gottsch, Inayat Ullah, Shaheen N Khan, Tayyab Husnain, Nadeem H Butt, Zaheeruddin A Qazi, Javed Akram, Sheikh Riazuddin, Radha Ayyagari and 2 more

Abstract read
In one paragraph

Article in Molecular vision, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
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  4. Heterogeneous network embedding for identifying symptom candidate genes.Journal of the American Medical Informatics Association : JAMIA · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Muhammad Asif NaeemNational Centre of Excellence in Molecular Biology, University of the Punjab, Lahore, Pakistan.
Alexander D H GottschThe Wilmer Eye Institute, Johns Hopkins University School of Medicine, Baltimore MD.
Inayat UllahNational Centre of Excellence in Molecular Biology, University of the Punjab, Lahore, Pakistan.
Shaheen N KhanNational Centre of Excellence in Molecular Biology, University of the Punjab, Lahore, Pakistan.
Tayyab HusnainNational Centre of Excellence in Molecular Biology, University of the Punjab, Lahore, Pakistan.
Nadeem H ButtAllama Iqbal Medical College, University of Health Sciences, Lahore, Pakistan.
Zaheeruddin A QaziLayton Rahmatulla Benevolent Trust Hospital, Lahore, Pakistan.
Javed AkramAllama Iqbal Medical College, University of Health Sciences, Lahore, Pakistan ; National Centre for Genetic Diseases, Shaheed Zulfiqar Ali Bhutto Medical University, Islamabad, Pakistan.
Sheikh RiazuddinNational Centre of Excellence in Molecular Biology, University of the Punjab, Lahore, Pakistan ; Allama Iqbal Medical College, University of Health Sciences, Lahore, Pakistan ; National Centre for Genetic Diseases, Shaheed Zulfiqar Ali Bhutto Medical University, Islamabad, Pakistan.
Radha AyyagariShiley Eye Institute, University of California San Diego, La Jolla CA.
J Fielding HejtmancikOphthalmic Genetics and Visual Function Branch, National Eye Institute, National Institutes of Health, Bethesda MD.
S Amer RiazuddinThe Wilmer Eye Institute, Johns Hopkins University School of Medicine, Baltimore MD.

Funding

Inherited Ocular DiseasesZIAEY000272 · NEI · NATIONAL EYE INSTITUTE · PI HEJTMANCIK, JAMES F. · 2009 to 2025
$27.0M
Molecular Basis of Hereditary Retinal DegenerationsR01EY021237 · NEI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI AYYAGARI, RADHA · 2011 to 2020
$5.6M
NEI NIH HHS R01 EY021237NEI NIH HHS R01EY021237
6 · The paper itself

Abstract

purposeThis study was undertaken to investigate the causal mutations responsible for autosomal recessive congenital stationary night blindness (CSNB) in consanguineous Pakistani families.

methodsTwo consanguineous families with multiple individuals manifesting symptoms of stationary night blindness were recruited. Affected individuals underwent a detailed ophthalmological examination, including fundus examination and electroretinography. Blood samples were collected and genomic DNA was extracted. Exclusion analyses were completed by genotyping closely spaced microsatellite markers, and two-point logarithm of odds (LOD) scores were calculated. All coding exons, along with the exon-intron boundaries of GRM6, were sequenced bidirectionally.

resultsAccording to the medical history available to us, affected individuals in both families had experienced night blindness from the early years of their lives. Fundus photographs of affected individuals in both the families appeared normal, with no signs of attenuated arteries or bone spicule pigmentation. The scotopic electroretinogram (ERG) response were absent in all of the affected individuals, while the photopic measurements show reduced b-waves. During exclusion analyses, both families localized to a region on chromosome 5q that harbors GRM6, a gene previously associated with autosomal recessive CSNB. Bidirectional sequencing of GRM6 identified homozygous single base pair changes, specifically c.1336C>T (p.R446X) and c.2267G>A (p.G756D) in families PKRP170 and PKRP172, respectively.

conclusionsWe identified a novel nonsense and a previously reported missense mutation in GRM6 that were responsible for autosomal recessive CSNB in patients of Pakistani decent.

Indexed as

Chromosomes, Human, Pair 5ConsanguinityMutationAdultAgedAmino Acid SequenceAnimalsBase SequenceElectroretinographyExonsEye Diseases, HereditaryFemaleGene ExpressionGenes, RecessiveGenetic Diseases, X-LinkedHomozygoteGRM6 protein, humanReceptors, Glutamate

Identifiers

PMID26628857
PMCPMC4636350

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.