Evidence map›Paper›PMID 26627249›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

Critical role of Chlamydomonas reinhardtii ferredoxin-5 in maintaining membrane structure and dark metabolism.

Wenqiang Yang, Tyler M Wittkopp, Xiaobo Li, Jaruswan Warakanont, Alexandra Dubini, Claudia Catalanotti, Rick G Kim, Eva C M Nowack, Luke C M Mackinder, Munevver Aksoy and 13 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 70 citations in OpenAlex.

  1. Article
  2. Article
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  4. Developing a media formulation to sustainFrontiers in bioengineering and biotechnology · 2025
    Article
  5. The AlgaInternational journal of molecular sciences · 2023
    Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Changing the tracks: screening for electron transfer proteins to support hydrogen production.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2022
    Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Multiomics resolution of molecular events during a day in the life of Chlamydomonas.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 6 institutions in 2 countries.

Wenqiang YangDepartment of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305; wenqiangy@gmail.com.ORCID 0000-0001-5600-4076
Tyler M WittkoppDepartment of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305; Department of Biology, Stanford University, Stanford, CA 94305;
Xiaobo LiDepartment of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305;ORCID 0000-0003-3951-9646
Jaruswan WarakanontDepartment of Plant Biology, Michigan State University, East Lansing, MI 48824;
Alexandra DubiniNational Renewable Energy Laboratory, Golden, CO 80401;
Claudia CatalanottiDepartment of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305;
Rick G KimDepartment of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305; Department of Biology, Stanford University, Stanford, CA 94305;
Eva C M NowackDepartment of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305;
Luke C M MackinderDepartment of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305;
Munevver AksoyDepartment of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305;
Mark Dudley PageDepartment of Chemistry and Biochemistry, University of California, Los Angeles, CA 90095;
Sarah D'AdamoDepartment of Chemistry and Geochemistry, Colorado School of Mines, Golden, CO 80401;
Shai SaroussiDepartment of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305;
Mark HeinnickelDepartment of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305;
Xenie JohnsonDepartment of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305; Commissariat à l'Énergie Atomique, Centre National de la Recherche Scientifique, Aix-Marseille Université, Cadarache, Saint-Paul-lez-Durance F-13108, France;
Pierre RichaudCommissariat à l'Énergie Atomique, Centre National de la Recherche Scientifique, Aix-Marseille Université, Cadarache, Saint-Paul-lez-Durance F-13108, France;
Jean AlricDepartment of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305; Commissariat à l'Énergie Atomique, Centre National de la Recherche Scientifique, Aix-Marseille Université, Cadarache, Saint-Paul-lez-Durance F-13108, France;
Marko BoehmNational Renewable Energy Laboratory, Golden, CO 80401;
Martin C JonikasDepartment of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305;
Christoph BenningMichigan State University-Department of Energy Plant Research Laboratory, Michigan State University, East Lansing, MI 48824;
Sabeeha S MerchantDepartment of Chemistry and Biochemistry, University of California, Los Angeles, CA 90095; Institute of Genomics and Proteomics, University of California, Los Angeles, CA 90095.
Matthew C PosewitzDepartment of Chemistry and Geochemistry, Colorado School of Mines, Golden, CO 80401;
Arthur R GrossmanDepartment of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305;
Carnegie Institution for Science · USCentre National de la Recherche Scientifique · FRColorado School of Mines · USMichigan State University · USNational Laboratory of the Rockies · USUniversity of California, Los Angeles · US

Funding

Nutritional Cu Signaling and HomeostasisR01GM042143 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI SABEEHA MERCHANT · 1995 to 2026
$4.6M
Nutritional Copper Signaling and HomeostasisR37GM042143 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI MERCHANT, SABEEHA · 2011 to 2020
$4.3M
CU-DEPENDENT TRANSCRIPTIONAL REGULATIONR29GM042143 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI MERCHANT, SABEEHA · 1989 to 1993
–
NCRR NIH HHS 1S10RR02678001NIGMS NIH HHS GM42143NIGMS NIH HHS R01 GM042143NIGMS NIH HHS R37 GM042143
6 · The paper itself

Abstract

Photosynthetic microorganisms typically have multiple isoforms of the electron transfer protein ferredoxin, although we know little about their exact functions. Surprisingly, a Chlamydomonas reinhardtii mutant null for the ferredoxin-5 gene (FDX5) completely ceased growth in the dark, with both photosynthetic and respiratory functions severely compromised; growth in the light was unaffected. Thylakoid membranes in dark-maintained fdx5 mutant cells became severely disorganized concomitant with a marked decrease in the ratio of monogalactosyldiacylglycerol to digalactosyldiacylglycerol, major lipids in photosynthetic membranes, and the accumulation of triacylglycerol. Furthermore, FDX5 was shown to physically interact with the fatty acid desaturases CrΔ4FAD and CrFAD6, likely donating electrons for the desaturation of fatty acids that stabilize monogalactosyldiacylglycerol. Our results suggest that in photosynthetic organisms, specific redox reactions sustain dark metabolism, with little impact on daytime growth, likely reflecting the tailoring of electron carriers to unique intracellular metabolic circuits under these two very distinct redox conditions.

Indexed as

Chlamydomonas reinhardtiiFatty Acid DesaturasesFerredoxinsGalactolipidsOxidation-ReductionPlant ProteinsThylakoids2Fe-2S ferredoxindigalactosyldiacylglycerolFatty Acid DesaturasesFerredoxinsGalactolipidsPlant Proteinsdark growthferredoxinredox regulationthylakoid lipidstriacylglycerol

Identifiers

PMID26627249
PMCPMC4672766
OpenAlexW2174690494

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.