Evidence map›Paper›PMID 26626480›Full record

ArticleMolecular cell2015

PARP-1 Activation Requires Local Unfolding of an Autoinhibitory Domain.

Jennine M Dawicki-McKenna, Marie-France Langelier, Jamie E DeNizio, Amanda A Riccio, Connie D Cao, Kelly R Karch, Michael McCauley, Jamin D Steffen, Ben E Black, John M Pascal

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cell, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 182 papers.

0numbers the graph read from it
0cells of the map it votes in
182citing papers in PubMed
5.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

182 citing papers in PubMed, 345 citations in OpenAlex.

  1. NADRSC chemical biology · 2026
    Review
  2. Article
  3. Article
  4. Article
  5. PARP1 Exhibits an Enzymatically Inactive Chromatin Binding Mode.bioRxiv : the preprint server for biology · 2026
    Article
  6. Review
  7. Article
  8. Review
  9. Cancer-associated TRF1 mutations alter PARP1 interaction dynamics: an in silico study.Mammalian genome : official journal of the International Mammalian Genome Society · 2026
    Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. A Population-Specific PARP1 Gene Variation Modulates PARP Trapping.bioRxiv : the preprint server for biology · 2025
    Article
  18. Article
  19. Review
  20. Review

122 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Jennine M Dawicki-McKennaDepartment of Biochemistry and Biophysics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104-6059, USA.
Marie-France LangelierDepartment of Biochemistry and Molecular Biology, Sidney Kimmel Cancer Center, Thomas Jefferson University, Philadelphia, PA 19107-5544, USA.
Jamie E DeNizioDepartment of Biochemistry and Biophysics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104-6059, USA; Graduate Program in Biochemistry and Molecular Biophysics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104-6059, USA.
Amanda A RiccioDepartment of Biochemistry and Molecular Biology, Sidney Kimmel Cancer Center, Thomas Jefferson University, Philadelphia, PA 19107-5544, USA.
Connie D CaoDepartment of Biochemistry and Biophysics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104-6059, USA.
Kelly R KarchDepartment of Biochemistry and Biophysics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104-6059, USA; Graduate Program in Biochemistry and Molecular Biophysics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104-6059, USA.
Michael McCauleyDepartment of Biochemistry and Molecular Biology, Sidney Kimmel Cancer Center, Thomas Jefferson University, Philadelphia, PA 19107-5544, USA.
Jamin D SteffenDepartment of Biochemistry and Molecular Biology, Sidney Kimmel Cancer Center, Thomas Jefferson University, Philadelphia, PA 19107-5544, USA.
Ben E BlackDepartment of Biochemistry and Biophysics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104-6059, USA; Graduate Program in Biochemistry and Molecular Biophysics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104-6059, USA. Electronic address: blackbe@mail.med.upenn.edu.
John M PascalDepartment of Biochemistry and Molecular Biology, Sidney Kimmel Cancer Center, Thomas Jefferson University, Philadelphia, PA 19107-5544, USA. Electronic address: john.pascal@umontreal.ca.
University of Pennsylvania · USThomas Jefferson University · USSidney Kimmel Cancer Center · US

Funding

X-Ray Crystallography and Macromolecular CharacterizationP30CA056036 · NCI · THOMAS JEFFERSON UNIVERSITY · PI DANIEL P SILVER · 1995 to 2026
$94.8M
Structural Biochemistry of PARP-1R01GM087282 · NIGMS · THOMAS JEFFERSON UNIVERSITY · PI PASCAL, JOHN M · 2011 to 2015
$1.7M
The dynamic association of Aurora B with centromeric chromatinR01GM105654 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI BLACK, BEN E. · 2015 to 2018
$1.2M
Discovery of new classes of PARP-1 inhibitors for the treatment of cancerF32CA174221 · NCI · THOMAS JEFFERSON UNIVERSITY · PI STEFFEN, JAMIN · 2013 to 2015
$137k
Investigating the regulation of Aurora B levels at the centromereF32GM108360 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI DAWICKI MCKENNA, JENNINE M · 2014 to 2015
$109k
NCI NIH HHS CA174221NCI NIH HHS F32 CA174221NCI NIH HHS P30 CA056036NCI NIH HHS P30CA56036NIGMS NIH HHS F32 GM108360NIGMS NIH HHS GM087282NIGMS NIH HHS GM108360NIGMS NIH HHS R01 GM087282NIGMS NIH HHS R01 GM105654
6 · The paper itself

Abstract

Poly(ADP-ribose) polymerase-1 (PARP-1) creates the posttranslational modification PAR from substrate NAD(+) to regulate multiple cellular processes. DNA breaks sharply elevate PARP-1 catalytic activity to mount a cell survival repair response, whereas persistent PARP-1 hyperactivation during severe genotoxic stress is associated with cell death. The mechanism for tight control of the robust catalytic potential of PARP-1 remains unclear. By monitoring PARP-1 dynamics using hydrogen/deuterium exchange-mass spectrometry (HXMS), we unexpectedly find that a specific portion of the helical subdomain (HD) of the catalytic domain rapidly unfolds when PARP-1 encounters a DNA break. Together with biochemical and crystallographic analysis of HD deletion mutants, we show that the HD is an autoinhibitory domain that blocks productive NAD(+) binding. Our molecular model explains how PARP-1 DNA damage detection leads to local unfolding of the HD that relieves autoinhibition, and has important implications for the design of PARP inhibitors.

Indexed as

Protein UnfoldingCatalytic DomainCrystallography, X-RayDeuterium Exchange MeasurementDNADNA BreaksDNA RepairHumansModels, MolecularMutationNADPoly (ADP-Ribose) Polymerase-1Poly(ADP-ribose) PolymerasesProtein Structure, SecondaryDNANADPARP1 protein, humanPARP2 protein, humanPoly (ADP-Ribose) Polymerase-1Poly(ADP-ribose) Polymerases

Identifiers

PMID26626480
PMCPMC4712911
OpenAlexW2177419974

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.