Evidence map›Paper›PMID 26621368›Full record

ArticleMolecular genetics and genomics : MGG2016

Novel mutations in EVC cause aberrant splicing in Ellis-van Creveld syndrome.

Lisong Shi, Chunyan Luo, Mairaj K Ahmed, Ali B Attaie, Xiaoqian Ye

Abstract read
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In one paragraph

Article in Molecular genetics and genomics : MGG, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Trial
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Lisong ShiDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.
Chunyan LuoKey Laboratory of Molecular Biophysics of Ministry of Education, College of Life Science and Technology and Center for Human Genome Research, Huazhong University of Science and Technology, Wuhan, People's Republic of China.
Mairaj K AhmedDepartment of Dentistry/Oral and Maxillofacial Surgery, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Ali B AttaieDepartment of Dentistry/Oral and Maxillofacial Surgery, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Xiaoqian YeDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA. xiaoqian.ye@mssm.edu.ORCID http://orcid.org/0000-0001-6227-9068
Huazhong University of Science and Technology · CNIcahn School of Medicine at Mount Sinai · USWuhan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ellis-van Creveld syndrome (EvC) is a rare autosomal recessive disorder characterized by disproportionate chondrodysplasia, postaxial polydactyly, nail dystrophy, dental abnormalities and in a proportion of patients, congenital cardiac malformations. Weyers acrofacial dysostosis (Weyers) is another dominantly inherited disorder allelic to EvC syndrome but with milder phenotypes. Both disorders can result from loss-of-function mutations in either EVC or EVC2 gene, and phenotypes associated with the two gene mutations are clinically indistinguishable. We present here a clinical and molecular analysis of a Chinese family manifested specific features of EvC syndrome. Sequencing of both EVC and EVC2 identified two novel heterozygous splice site mutations c.384+5G>C in intron 3 and c.1465-1G>A in intron 10 in EVC, which were inherited from mother and father, respectively. In vitro minigene expression assay, RT-PCR and sequencing analysis demonstrated that c.384+5G>C mutation abolished normal splice site and created a new cryptic acceptor site within exon 4, whereas c.1465-1G>A mutation affected consensus splice junction site and resulted in full exon 11 skipping. These two aberrant pre-mRNA splicing processes both produced in-frame abnormal transcripts that possibly led to abolishment of important functional domains. To our knowledge, this is the first report of EVC mutations that cause EvC syndrome in Chinese population. Our data revealed that EVC splice site mutations altered splicing pattern and helped elucidate the pathogenesis of EvC syndrome.

Indexed as

Abnormalities, MultipleAdultAlternative SplicingDNA Mutational AnalysisEllis-Van Creveld SyndromeExonsFemaleHeterozygoteHumansInfantIntercellular Signaling Peptides and ProteinsIntronsLimb Deformities, CongenitalMaleMembrane ProteinsMutationEVC2 protein, humanEVC protein, humanIntercellular Signaling Peptides and ProteinsMembrane ProteinsProteinsRNA Splice SitesAberrant splicingEllis–van Creveld syndromeEVCMinigene

Identifiers

PMID26621368
OpenAlexW2187073465

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.