Evidence map›Paper›PMID 26621243›Full record

ArticleImmunologic research2016

Genetic predisposition of variants in TLR2 and its co-receptors to severe malaria in Odisha, India.

Subhendu Panigrahi, Avishek Kar, Sagnika Tripathy, Manoj K Mohapatra, Gunanidhi Dhangadamajhi

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Article in Immunologic research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 14 citations in OpenAlex.

  1. Review
  2. Rapid diagnosis ofFrontiers in cellular and infection microbiology · 2022
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4 · The record

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5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Subhendu PanigrahiDepartment of General Medicine, VSS Medical College and Hospital, Sambalpur, Odisha, 768017, India.
Avishek KarDepartment of Biotechnology, North Orissa University, Baripada, Odisha, 757003, India.
Sagnika TripathyDepartment of General Medicine, VSS Medical College and Hospital, Sambalpur, Odisha, 768017, India.
Manoj K MohapatraDepartment of General Medicine, VSS Medical College and Hospital, Sambalpur, Odisha, 768017, India.
Gunanidhi DhangadamajhiDepartment of Biotechnology, North Orissa University, Baripada, Odisha, 757003, India. gunarmrc@gmail.com.
Veer Surendra Sai Medical College and Hospital · INMaharaja Sriram Chandra Bhanja Deo University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although the role of TLRs signalling in malaria pathogenesis is well established, contribution of individual TLR to clinical outcome of malaria still remains inconclusive. Given the importance of TLR2 and its co-receptors in recognising distinct structural forms of key malaria toxins and mediating innate immune response, it is essential to delineate their genetic contribution. Variants in TLR1 (I602S) and TLR6 (P249S) were genotyped by PCR-RFLP methods, and TLR2 (I/D) was genotyped by PCR in 200 samples each from uncomplicated malaria (UM) and severe malaria (SM). Further, SM was categorised into its sub-clinical groups (CM and NCSM or SOD and MODS) and analysed. The results showed the PP genotype of TLR6 (P249S) to be significantly more common in UM (P < 0.0001), whereas the 'SS' genotype was the risk factor for SM including its sub-clinical categories. The TLR1 (602S) and TLR2 (D) variants were significantly high in patients with CM; however, negative LD was observed between TLR2 and TLR6 in NCSM and MODS. Haplotype analysis showed significantly high frequency of I-I-S haplotype in all forms of subclinical SM and was associated with low parasite load in SM (P = 0.013). The haplotypes I-D-S and S-I-P were significantly high in SOD and CM, respectively. The TLR6 '249S' variant appeared to be the dominant determinant for genetic predisposition to SM and that its association with either TLR2 'D' or TLR1 '602S' modulates for CM development. The present study opens up several new avenues for their exploration and validation in future studies in different global settings for malaria.

Indexed as

Genetic Predisposition to DiseaseAdultDisease ProgressionDNA Mutational AnalysisGene FrequencyGenotypeHumansIndiaMalariaParasite LoadPolymorphism, GeneticSignal TransductionToll-Like Receptor 1Toll-Like Receptor 2Toll-Like Receptor 6Toll-Like Receptor 1Toll-Like Receptor 2Toll-Like Receptor 6HaplotypeLinkage disequilibriumMalariaPolymorphismTLR2 family

Identifiers

PMID26621243
OpenAlexW2247046959

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.