Evidence map›Paper›PMID 26619259›Full record

ArticleCancer2016

Using computer-extracted image phenotypes from tumors on breast magnetic resonance imaging to predict breast cancer pathologic stage.

Elizabeth S Burnside, Karen Drukker, Hui Li, Ermelinda Bonaccio, Margarita Zuley, Marie Ganott, Jose M Net, Elizabeth J Sutton, Kathleen R Brandt, Gary J Whitman and 10 more

Open access · bronzeAbstract read
In one paragraph

Article in Cancer, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
5.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 73 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Clinical Artificial Intelligence Applications: Breast Imaging.Radiologic clinics of North America · 2021
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Machine learning in breast MRI.Journal of magnetic resonance imaging : JMRI · 2020
    Review
  17. Review
  18. AI in Medical Imaging Informatics: Current Challenges and Future Directions.IEEE journal of biomedical and health informatics · 2020
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 11 institutions in 1 country.

Elizabeth S BurnsideDepartment of Radiology, University of Wisconsin School of Medicine and Public Health, Madison, Wisconsin.
Karen DrukkerDepartment of Radiology, University of Chicago, Chicago, Illinois.
Hui LiDepartment of Radiology, University of Chicago, Chicago, Illinois.
Ermelinda BonaccioDepartment of Radiology, Roswell Park Cancer Institute, Buffalo, New York.
Margarita ZuleyDepartment of Radiology, University of Pittsburgh, Pittsburgh, Pennsylvania.
Marie GanottDepartment of Radiology, University of Pittsburgh, Pittsburgh, Pennsylvania.
Jose M NetUniversity of Miami, Miller School of Medicine, Miami, Florida.
Elizabeth J SuttonDepartment of Radiology, Memorial Sloan Kettering Cancer Center, New York, New York.
Kathleen R BrandtDepartment of Diagnostic Radiology, Mayo Clinic, Rochester, Minnesota.
Gary J WhitmanDepartment of Diagnostic Imaging, The University of Texas MD Anderson Cancer Center, Houston, Texas.
Suzanne D ConzenDepartment of Radiology, University of Chicago, Chicago, Illinois.
Li LanDepartment of Radiology, University of Chicago, Chicago, Illinois.
Yuan JiDepartment of Health Studies, University of Chicago, Chicago, Illinois.
Yitan ZhuProgram of Computational Genomics and Medicine, NorthShore University HealthSystem, Evanston, Illinois.
Carl C JaffeNational Cancer Institute, National Institutes of Health, Rockville, Maryland.
Erich P HuangNational Cancer Institute, National Institutes of Health, Rockville, Maryland.
John B FreymannNational Cancer Institute, National Institutes of Health, Rockville, Maryland.
Justin S KirbyNational Cancer Institute, National Institutes of Health, Rockville, Maryland.
Elizabeth A MorrisDepartment of Radiology, Memorial Sloan Kettering Cancer Center, New York, New York.
Maryellen L GigerDepartment of Radiology, University of Chicago, Chicago, Illinois.
University of Chicago · USMemorial Sloan Kettering Cancer Center · USNational Cancer Institute · USNational Institutes of Health · USNorthShore University HealthSystem · USUniversity of Pittsburgh · USMayo Clinic · USRoswell Park Comprehensive Cancer Center · USThe University of Texas MD Anderson Cancer Center · USUniversity of Miami · USUniversity of Wisconsin–Madison · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Elisa de Stanchina · 1985 to 2026
$347.4M
UW COMPREHENSIVE CANCER CENTER SUPPORTP30CA014520 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI Nihal Ahmad · 1985 to 2026
$142.6M
Re-Engineering Translational Research at the University of ChicagoUL1TR000430 · NCATS · UNIVERSITY OF CHICAGO · PI SOLWAY, JULIAN · 2012 to 2016
$20.2M
TrainingU54AI117924 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI CRAVEN, MARK W. · 2014 to 2018
$11.3M
RESEARCH TRAINING IN MEDICAL PHYSICST32EB002103 · NIBIB · UNIVERSITY OF CHICAGO · PI ARMATO, SAMUEL G. · 2003 to 2019
$4.7M
Quantitative Image Analysis for Assessing Response to Breast Cancer TherapyU01CA195564 · NCI · UNIVERSITY OF CHICAGO · PI GIGER, MARYELLEN L. · 2015 to 2019
$2.5M
Bayesian models for cancer prognosis by integrating diverse types of dataR01CA132897 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI JI, YUAN, MUELLER, PETER · 2008 to 2019
$2.1M
Informatics Techniques to Optimize Mammography for Aging PopulationsR01CA165229 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI BURNSIDE, ELIZABETH S · 2012 to 2016
$1.7M
Integrating Machine Learning and Physician Expertise for Breast Cancer DiagnosisR01LM010921 · NLM · UNIVERSITY OF WISCONSIN-MADISON · PI BURNSIDE, ELIZABETH S · 2011 to 2014
$1.2M
Mentoring And Research In Patient-Oriented Breast Cancer DiagnosisK24CA194251 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI BURNSIDE, ELIZABETH S · 2015 to 2019
$963k
NCATS NIH HHS UL1 TR000430NCI NIH HHS K24 CA194251NCI NIH HHS K24CA194251NCI NIH HHS P30 CA008748NCI NIH HHS P30 CA014520NCI NIH HHS R01 CA132897NCI NIH HHS R01 CA165229NCI NIH HHS R01CA165229NCI NIH HHS U01 CA195564NIAID NIH HHS U54 AI117924NIBIB NIH HHS T32 EB002103NIBIB NIH HHS T32EB002103NLM NIH HHS R01 LM010921NLM NIH HHS R01LM010921
6 · The paper itself

Abstract

backgroundThe objective of this study was to demonstrate that computer-extracted image phenotypes (CEIPs) of biopsy-proven breast cancer on magnetic resonance imaging (MRI) can accurately predict pathologic stage.

methodsThe authors used a data set of deidentified breast MRIs organized by the National Cancer Institute in The Cancer Imaging Archive. In total, 91 biopsy-proven breast cancers were analyzed from patients who had information available on pathologic stage (stage I, n = 22; stage II, n = 58; stage III, n = 11) and surgically verified lymph node status (negative lymph nodes, n = 46; ≥ 1 positive lymph node, n = 44; no lymph nodes examined, n = 1). Tumors were characterized according to 1) radiologist-measured size and 2) CEIP. Then, models were built that combined 2 CEIPs to predict tumor pathologic stage and lymph node involvement, and the models were evaluated in a leave-1-out, cross-validation analysis with the area under the receiver operating characteristic curve (AUC) as the value of interest.

resultsTumor size was the most powerful predictor of pathologic stage, but CEIPs that captured biologic behavior also emerged as predictive (eg, stage I and II vs stage III demonstrated an AUC of 0.83). No size measure was successful in the prediction of positive lymph nodes, but adding a CEIP that described tumor "homogeneity" significantly improved discrimination (AUC = 0.62; P = .003) compared with chance.

conclusionsThe current results indicate that MRI phenotypes have promise for predicting breast cancer pathologic stage and lymph node status. Cancer 2016;122:748-757. © 2015 American Cancer Society.

Indexed as

AdultAgedAged, 80 and overBreast NeoplasmsCarcinoma, Ductal, BreastCarcinoma, LobularFemaleHumansImage Processing, Computer-AssistedLymph NodesMagnetic Resonance ImagingMiddle AgedNeoplasm StagingPhenotypePrognosisROC Curvebreast cancer stagemagnetic resonance imaging (MRI)prognosisquantitative image analysis

Identifiers

PMID26619259
PMCPMC4764425
OpenAlexW2184968530

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.