Evidence map›Paper›PMID 26618509›Full record

ArticlePLoS neglected tropical diseases2015

A Genomic Approach to Resolving Relapse versus Reinfection among Four Cases of Buruli Ulcer.

Miriam Eddyani, Koen Vandelannoote, Conor J Meehan, Sabin Bhuju, Jessica L Porter, Julia Aguiar, Torsten Seemann, Michael Jarek, Mahavir Singh, Françoise Portaels and 2 more

Open access · goldAbstract readCase Reports
In one paragraph

Article in PLoS neglected tropical diseases, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 5 countries.

Miriam EddyaniDepartment of Biomedical Sciences, Institute of Tropical Medicine, Antwerp, Belgium.
Koen VandelannooteDepartment of Biomedical Sciences, Institute of Tropical Medicine, Antwerp, Belgium.
Conor J MeehanDepartment of Biomedical Sciences, Institute of Tropical Medicine, Antwerp, Belgium.
Sabin BhujuHelmholtz Centre for Infection Research, GMAK, Braunschweig, Germany.
Jessica L PorterDepartment of Microbiology and Immunology, Doherty Institute for Infection and Immunity, University of Melbourne, Melbourne, Victoria, Australia.
Julia AguiarCentre de Dépistage et de Traitement de l'Ulcère de Buruli Gbemotin, Zagnanado, Benin.
Torsten SeemannVictorian Life Sciences Computation Initiative, University of Melbourne, Parkville, Victoria, Australia.
Michael JarekHelmholtz Centre for Infection Research, GMAK, Braunschweig, Germany.
Mahavir SinghHelmholtz Centre for Infection Research, GMAK, Braunschweig, Germany.
Françoise PortaelsDepartment of Biomedical Sciences, Institute of Tropical Medicine, Antwerp, Belgium.
Timothy P StinearDepartment of Microbiology and Immunology, Doherty Institute for Infection and Immunity, University of Melbourne, Melbourne, Victoria, Australia.
Bouke C de JongDepartment of Biomedical Sciences, Institute of Tropical Medicine, Antwerp, Belgium.
Instituut voor Tropische Geneeskunde · BEHelmholtz Centre for Infection Research · DEUniversity of Melbourne · AUNew York University · USPeter Doherty Institute · AUProgamme National Contre le Tuberculose · BJ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundIncreased availability of Next Generation Sequencing (NGS) techniques allows, for the first time, to distinguish relapses from reinfections in patients with multiple Buruli ulcer (BU) episodes. METHODOLOGY: We compared the number and location of single nucleotide polymorphisms (SNPs) identified by genomic screening between four pairs of Mycobacterium ulcerans isolates collected at the time of first diagnosis and at recurrence, derived from a collection of almost 5000 well characterized clinical samples from one BU treatment center in Benin. PRINCIPAL

findingsThe findings suggest that after surgical treatment-without antibiotics-the second episodes were due to relapse rather than reinfection. Since specific antibiotics were introduced for the treatment of BU, the one patient with a culture available from both disease episodes had M. ulcerans isolates with a genomic distance of 20 SNPs, suggesting the patient was most likely reinfected rather than having a relapse.

conclusionsTo our knowledge, this study is the first to study recurrences in M. ulcerans using NGS, and to identify exogenous reinfection as causing a recurrence of BU. The occurrence of reinfection highlights the contribution of ongoing exposure to M. ulcerans to disease recurrence, and has implications for vaccine development.

Indexed as

Genome, BacterialPolymorphism, Single NucleotideAdolescentBeninBuruli UlcerChildFemaleGenomicsHumansMaleMolecular EpidemiologyMolecular TypingMycobacterium ulceransRecurrenceRetrospective Studies

Identifiers

PMID26618509
PMCPMC4664471
OpenAlexW2187839660

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.