Evidence map›Paper›PMID 26618502›Full record

ArticlePloS one2015

Amyloid Precursor Protein Translation Is Regulated by a 3'UTR Guanine Quadruplex.

Ezekiel Crenshaw, Brian P Leung, Chun Kit Kwok, Michal Sharoni, Kalee Olson, Neeraj P Sebastian, Sara Ansaloni, Reinhard Schweitzer-Stenner, Michael R Akins, Philip C Bevilacqua and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 56 citations in OpenAlex.

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  19. GRNA biology · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Ezekiel CrenshawDepartment of Biology, Drexel University, Philadelphia, PA, United States of America.
Brian P LeungDepartment of Biology, Drexel University, Philadelphia, PA, United States of America.
Chun Kit KwokDepartment of Chemistry, Pennsylvania State University, University Park, PA, United States of America.
Michal SharoniDepartment of Biology, Drexel University, Philadelphia, PA, United States of America.
Kalee OlsonDepartment of Chemistry, Pennsylvania State University, University Park, PA, United States of America.
Neeraj P SebastianDepartment of Biology, Drexel University, Philadelphia, PA, United States of America.
Sara AnsaloniDepartment of Biology, Drexel University, Philadelphia, PA, United States of America.
Reinhard Schweitzer-StennerDepartment of Chemistry, Drexel University, Philadelphia, PA, United States of America.
Michael R AkinsDepartment of Biology, Drexel University, Philadelphia, PA, United States of America.
Philip C BevilacquaDepartment of Chemistry, Pennsylvania State University, University Park, PA, United States of America.
Aleister J SaundersDepartment of Biology, Drexel University, Philadelphia, PA, United States of America.
Drexel University · USPennsylvania State University · USUniversity of Cambridge · GB

Funding

University of Pennsylvania Postdoctoral Opportunities in Research and TeachingK12GM081259 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI Janis K. Burkhardt · 2007 to 2026
$20.1M
Identification and Characterization of APP Metabolism RegulatorsR01NS057295 · NINDS · DREXEL UNIVERSITY · PI SAUNDERS, ALEISTER J. · 2008 to 2012
$1.6M
Presynaptic Fragile X ProteinsR00MH090237 · NIMH · DREXEL UNIVERSITY · PI AKINS, MICHAEL R · 2013 to 2015
$747k
Characterizing G-Quadruplex mediated Regulation of Amyloid Precursor Protein ExprR36AG048247 · NIA · DREXEL UNIVERSITY · PI CRENSHAW, EZEKIEL MATTHEW DAVID · 2014 to 2015
$133k
NIA NIH HHS R36 AG048247NIA NIH HHS R36AG048247NIGMS NIH HHS K12 GM081259NIMH NIH HHS R00 MH090237NIMH NIH HHS R00MH90237NINDS NIH HHS R01 NS057295NINDS NIH HHS R01NS057295
6 · The paper itself

Abstract

A central event in Alzheimer's disease is the accumulation of amyloid β (Aβ) peptides generated by the proteolytic cleavage of the amyloid precursor protein (APP). APP overexpression leads to increased Aβ generation and Alzheimer's disease in humans and altered neuronal migration and increased long term depression in mice. Conversely, reduction of APP expression results in decreased Aβ levels in mice as well as impaired learning and memory and decreased numbers of dendritic spines. Together these findings indicate that therapeutic interventions that aim to restore APP and Aβ levels must do so within an ideal range. To better understand the effects of modulating APP levels, we explored the mechanisms regulating APP expression focusing on post-transcriptional regulation. Such regulation can be mediated by RNA regulatory elements such as guanine quadruplexes (G-quadruplexes), non-canonical structured RNA motifs that affect RNA stability and translation. Via a bioinformatics approach, we identified a candidate G-quadruplex within the APP mRNA in its 3'UTR (untranslated region) at residues 3008-3027 (NM_201414.2). This sequence exhibited characteristics of a parallel G-quadruplex structure as revealed by circular dichroism spectrophotometry. Further, as with other G-quadruplexes, the formation of this structure was dependent on the presence of potassium ions. This G-quadruplex has no apparent role in regulating transcription or mRNA stability as wild type and mutant constructs exhibited equivalent mRNA levels as determined by real time PCR. Instead, we demonstrate that this G-quadruplex negatively regulates APP protein expression using dual luciferase reporter and Western blot analysis. Taken together, our studies reveal post-transcriptional regulation by a 3'UTR G-quadruplex as a novel mechanism regulating APP expression.

Indexed as

3' Untranslated RegionsG-QuadruplexesAmyloid beta-Protein PrecursorHEK293 CellsHeLa CellsHumansProtein BiosynthesisRNA, Messenger3' Untranslated RegionsAmyloid beta-Protein PrecursorRNA, Messenger

Identifiers

PMID26618502
PMCPMC4664259
OpenAlexW2181976524

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.