Evidence map›Paper›PMID 26617618›Full record

ArticleFrontiers in plant science2015

JAZ Repressors: Potential Involvement in Nutrients Deficiency Response in Rice and Chickpea.

Ajit P Singh, Bipin K Pandey, Priyanka Deveshwar, Laxmi Narnoliya, Swarup K Parida, Jitender Giri

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
6.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 64 citations in OpenAlex.

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  8. Genome-Wide Identification of thePlants (Basel, Switzerland) · 2022
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  9. Fine Mapping of a Vigor QTL in Chickpea (Frontiers in plant science · 2022
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  19. Functional Characterization of the Steroid Reductase GenesInternational journal of molecular sciences · 2018
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  20. Characterization of Transcription Factor GeneFrontiers in plant science · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Ajit P SinghNational Institute of Plant Genome Research, Jawaharlal Nehru University New Delhi, India.
Bipin K PandeyNational Institute of Plant Genome Research, Jawaharlal Nehru University New Delhi, India.
Priyanka DeveshwarNational Institute of Plant Genome Research, Jawaharlal Nehru University New Delhi, India ; Department of Botany, Sri Aurobindo College, University of Delhi New Delhi, India.
Laxmi NarnoliyaNational Institute of Plant Genome Research, Jawaharlal Nehru University New Delhi, India.
Swarup K ParidaNational Institute of Plant Genome Research, Jawaharlal Nehru University New Delhi, India.
Jitender GiriNational Institute of Plant Genome Research, Jawaharlal Nehru University New Delhi, India.
National Institute of Plant Genome Research · INJawaharlal Nehru University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Jasmonates (JA) are well-known phytohormones which play important roles in plant development and defense against pathogens. Jasmonate ZIM domain (JAZ) proteins are plant-specific proteins and act as transcriptional repressors of JA-responsive genes. JA regulates both biotic and abiotic stress responses in plants; however, its role in nutrient deficiency responses is very elusive. Although, JA is well-known for root growth inhibition, little is known about behavior of JAZ genes in response to nutrient deficiencies, under which root architectural alteration is an important adaptation. Using protein sequence homology and a conserved-domains approach, here we identify 10 novel JAZ genes from the recently sequenced Chickpea genome, which is one of the most nutrient efficient crops. Both rice and chickpea JAZ genes express in tissue- and stimuli-specific manners. Many of which are preferentially expressed in root. Our analysis further showed differential expression of JAZ genes under macro (NPK) and micronutrients (Zn, Fe) deficiency in rice and chickpea roots. While both rice and chickpea JAZ genes showed a certain level of specificity toward type of nutrient deficiency, generally majority of them showed induction under K deficiency. Generally, JAZ genes showed an induction at early stages of stress and expression declined at later stages of macro-nutrient deficiency. Our results suggest that JAZ genes might play a role in early nutrient deficiency response both in monocot and dicot roots, and information generated here can be further used for understanding the possible roles of JA in root architectural alterations for nutrient deficiency adaptations.

Indexed as

gene expressionjas degronjasmonatesnutrient deficiencyrootTIFY

Identifiers

PMID26617618
PMCPMC4639613
OpenAlexW2188160344

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.