Evidence map›Paper›PMID 26615192›Full record

ArticleNucleic acids research2016

Folding dynamics and conformational heterogeneity of human telomeric G-quadruplex structures in Na+ solutions by single molecule FRET microscopy.

Sofie L Noer, Søren Preus, Daniel Gudnason, Mikayel Aznauryan, Jean-Louis Mergny, Victoria Birkedal

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 78 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Sofie L NoerInterdisciplinary Nanoscience center (iNANO), Aarhus University, 8000 Aarhus, Denmark.
Søren PreusInterdisciplinary Nanoscience center (iNANO), Aarhus University, 8000 Aarhus, Denmark.
Daniel GudnasonInterdisciplinary Nanoscience center (iNANO), Aarhus University, 8000 Aarhus, Denmark.
Mikayel AznauryanInterdisciplinary Nanoscience center (iNANO), Aarhus University, 8000 Aarhus, Denmark.
Jean-Louis MergnyUniversity of Bordeaux, ARNA Lab, IECB, 33076 Bordeaux, France INSERM, U1212, IECB, 33607 Pessac, France.
Victoria BirkedalInterdisciplinary Nanoscience center (iNANO), Aarhus University, 8000 Aarhus, Denmark vicb@inano.au.dk.
Aarhus University · DKUniversité de Bordeaux · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

G-quadruplex structures can occur throughout the genome, including at telomeres. They are involved in cellular regulation and are potential drug targets. Human telomeric G-quadruplex structures can fold into a number of different conformations and show large conformational diversity. To elucidate the different G-quadruplex conformations and their dynamics, we investigated telomeric G-quadruplex folding using single molecule FRET microscopy in conditions where it was previously believed to yield low structural heterogeneity. We observed four FRET states in Na(+) buffers: an unfolded state and three G-quadruplex related states that can interconvert between each other. Several of these states were almost equally populated at low to medium salt concentrations. These observations appear surprising as previous studies reported primarily one G-quadruplex conformation in Na(+) buffers. Our results permit, through the analysis of the dynamics of the different observed states, the identification of a more stable G-quadruplex conformation and two transient G-quadruplex states. Importantly these results offer a unique view into G-quadruplex topological heterogeneity and conformational dynamics.

Indexed as

G-QuadruplexesFluorescence Resonance Energy TransferHumansMicroscopyNucleic Acid ConformationRepetitive Sequences, Nucleic AcidSodiumSolutionsTelomereSodiumSolutions

Identifiers

PMID26615192
PMCPMC4705662
OpenAlexW2224705212

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.