Evidence map›Paper›PMID 26613961›Full record

ArticleMolecular systems biology2015

Frequency modulation of ERK activation dynamics rewires cell fate.

Hyunryul Ryu, Minhwan Chung, Maciej Dobrzyński, Dirk Fey, Yannick Blum, Sung Sik Lee, Matthias Peter, Boris N Kholodenko, Noo Li Jeon, Olivier Pertz

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Molecular systems biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 117 papers.

0numbers the graph read from it
0cells of the map it votes in
117citing papers in PubMed
8.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

117 citing papers in PubMed, 229 citations in OpenAlex.

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  9. Two novel red-FRET ERK bosensors in the 670-720 nm range.Journal of biological engineering · 2025
    Article
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  13. Erk1Oncogene · 2025
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  20. Review

57 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 3 countries.

Hyunryul RyuSchool of Mechanical and Aerospace Engineering Seoul National University, Seoul, Korea Institute of Advanced Machinery and Design Seoul National University, Seoul, Korea.
Minhwan ChungSchool of Mechanical and Aerospace Engineering Seoul National University, Seoul, Korea.
Maciej DobrzyńskiSystem Biology Ireland, University College Dublin, Belfield Dublin, Ireland.
Dirk FeySystem Biology Ireland, University College Dublin, Belfield Dublin, Ireland.
Yannick BlumDepartment of Biomedicine, University of Basel, Basel, Switzerland.
Sung Sik LeeInstitute of Biochemistry, Zurich, Switzerland.
Matthias PeterInstitute of Biochemistry, Zurich, Switzerland.
Boris N KholodenkoSystem Biology Ireland, University College Dublin, Belfield Dublin, Ireland boris.kholodenko@ucd.ie njeon@snu.ac.kr olivier.pertz@izb.unibe.ch.
Noo Li JeonSchool of Mechanical and Aerospace Engineering Seoul National University, Seoul, Korea Institute of Advanced Machinery and Design Seoul National University, Seoul, Korea boris.kholodenko@ucd.ie njeon@snu.ac.kr olivier.pertz@izb.unibe.ch.
Olivier PertzDepartment of Biomedicine, University of Basel, Basel, Switzerland boris.kholodenko@ucd.ie njeon@snu.ac.kr olivier.pertz@izb.unibe.ch.
Seoul National University · KRUniversity College Dublin · IEUniversity of Basel · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transient versus sustained ERK MAP kinase (MAPK) activation dynamics induce proliferation versus differentiation in response to epidermal (EGF) or nerve (NGF) growth factors in PC-12 cells. Duration of ERK activation has therefore been proposed to specify cell fate decisions. Using a biosensor to measure ERK activation dynamics in single living cells reveals that sustained EGF/NGF application leads to a heterogeneous mix of transient and sustained ERK activation dynamics in distinct cells of the population, different than the population average. EGF biases toward transient, while NGF biases toward sustained ERK activation responses. In contrast, pulsed growth factor application can repeatedly and homogeneously trigger ERK activity transients across the cell population. These datasets enable mathematical modeling to reveal salient features inherent to the MAPK network. Ultimately, this predicts pulsed growth factor stimulation regimes that can bypass the typical feedback activation to rewire the system toward cell differentiation irrespective of growth factor identity.

Indexed as

AnimalsBiosensing TechniquesCell DifferentiationExtracellular Signal-Regulated MAP KinasesFluorescence Resonance Energy TransferIntercellular Signaling Peptides and ProteinsMicrofluidic Analytical TechniquesModels, BiologicalPC12 CellsRatsSignal TransductionSystems BiologyExtracellular Signal-Regulated MAP KinasesIntercellular Signaling Peptides and Proteinscell fate decisionsERK activity dynamicsFRET biosensorsignaling heterogeneitysingle cell biology

Identifiers

PMID26613961
PMCPMC4670727
OpenAlexW2176424950

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.