Evidence map›Paper›PMID 26612874›Full record

ArticleThe Journal of antimicrobial chemotherapy2016

Evaluation of CTX-M steady-state mRNA, mRNA half-life and protein production in various STs of Escherichia coli.

Chelsie N Geyer, Randal C Fowler, James R Johnson, Brian Johnston, Scott J Weissman, Peter Hawkey, Nancy D Hanson

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of antimicrobial chemotherapy, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.2field-weighted citation impact, top 53% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Review
  3. Microbiology spectrum · 2025
    Article
  4. Article
  5. Co-Harboring of Beta-Lactamases andAntibiotics (Basel, Switzerland) · 2023
    Article
  6. Characterizations ofFrontiers in microbiology · 2023
    Article
  7. Enhanced Prodigiosin Production inApplied and environmental microbiology · 2021
    Article
  8. Article
  9. Antibiotic-Resistance Genes inSaudi journal of medicine & medical sciences
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Chelsie N GeyerDepartment of Medical Microbiology and Immunology, Center for Research in Anti-Infectives and Biotechnology, Creighton University School of Medicine, 2500 California Plaza, Omaha, NE 68178, USA.
Randal C FowlerDepartment of Medical Microbiology and Immunology, Center for Research in Anti-Infectives and Biotechnology, Creighton University School of Medicine, 2500 California Plaza, Omaha, NE 68178, USA.
James R JohnsonVeterans Affairs Medical Center, Minneapolis, MN, USA University of Minnesota, Minneapolis, MN, USA.
Brian JohnstonVeterans Affairs Medical Center, Minneapolis, MN, USA University of Minnesota, Minneapolis, MN, USA.
Scott J WeissmanCenter for Global Infectious Diseases Research, Seattle Children's Research Institute, Seattle, WA 98101, USA.
Peter HawkeyPublic Health England (PHE), West Midlands Public Health Laboratory, Heart of England NHS Foundation Trust, Bordesley Green East, Birmingham B9 5SS, UK Institute of Microbiology and Infection, School of Biosciences, School of Immunity and Infection, University of Birmingham, Edgbaston Campus, Birmingham B15 2TT, UK.
Nancy D HansonDepartment of Medical Microbiology and Immunology, Center for Research in Anti-Infectives and Biotechnology, Creighton University School of Medicine, 2500 California Plaza, Omaha, NE 68178, USA ndhanson@creighton.edu.
Creighton University · USUniversity of Minnesota · USUniversity of Birmingham · GB

Funding

Gut reservoir of E. coli ST131I01CX000920 · VA · MINNEAPOLIS VA MEDICAL CENTER · PI JOHNSON, JAMES R · 2014 to 2021
–
CSRD VA I01 CX000920
6 · The paper itself

Abstract

objectivesHigh levels of β-lactamase production can impact treatment with a β-lactam/β-lactamase inhibitor combination. Goals of this study were to: (i) compare the mRNA and protein levels of CTX-M-15- and CTX-M-14-producing Escherichia coli from 18 different STs and 10 different phylotypes; (ii) evaluate the mRNA half-lives and establish a role for chromosomal- and/or plasmid-encoded factors; and (iii) evaluate the zones of inhibition for piperacillin/tazobactam and ceftolozane/tazobactam.

methodsDisc diffusion was used to establish zone size. RNA analysis was accomplished using real-time RT-PCR and CTX-M protein levels were evaluated by immunoblotting. Clinical isolates, transformants and transconjugants were used to evaluate mRNA half-lives.

resultsmRNA levels of CTX-M-15 were up to 165-fold higher compared with CTX-M-14. CTX-M-15 protein levels were 2-48-fold less than their respective transcript levels, while CTX-M-14 protein production was comparable to the observed transcript levels. Nineteen of 25 E. coli (76%) had extended CTX-M-15 mRNA half-lives of 5-15 min and 16 (100%) CTX-M-14 isolates had mRNA half-lives of <2-3 min. Transformants had mRNA half-lives of <2 min for both CTX-M-type transcripts, while transconjugant mRNA half-lives corresponded to the half-life of the donor. Ceftolozane/tazobactam zone sizes were ≥19 mm, while piperacillin/tazobactam zone sizes were ≥17 mm.

conclusionsCTX-M-15 mRNA and protein production did not correlate. Neither E. coli ST nor phylotype influenced the variability observed for CTX-M-15 mRNA or protein produced. mRNA half-life is controlled by a plasmid-encoded factor and may influence mRNA transcript levels, but not protein levels.

Indexed as

Anti-Bacterial Agentsbeta-LactamasesCephalosporinsDisk Diffusion Antimicrobial TestsEscherichia coliGenotypeHumansImmunoblottingPenicillanic AcidPiperacillinPiperacillin, Tazobactam Drug CombinationReal-Time Polymerase Chain ReactionReverse Transcriptase Polymerase Chain ReactionRNA, MessengerRNA StabilityTazobactamAnti-Bacterial Agentsbeta-lactamase CTX-M-14beta-lactamase CTX-M-15beta-Lactamasesceftolozane, tazobactam drug combinationCephalosporinsPenicillanic AcidPiperacillinPiperacillin, Tazobactam Drug CombinationRNA, MessengerTazobactam

Identifiers

PMID26612874
PMCPMC4743699
OpenAlexW2259779426

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.