Evidence map›Paper›PMID 26612517›Full record

ArticleInfectious diseases of poverty2015

Prediction of the next highly pathogenic avian influenza pandemic that can cause illness in humans.

Zhong-Wei Zhang, Ting Liu, Jian Zeng, Yang-Er Chen, Ming Yuan, Da-Wei Zhang, Feng Zhu, Shu Yuan

Abstract read
In one paragraph

Article in Infectious diseases of poverty, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Infectious Diseases of Poverty, the first five years.Infectious diseases of poverty · 2017
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Zhong-Wei ZhangCollege of Resources Science and Technology, Sichuan Agricultural University, Chengdu, 611130, China. zzwzhang@126.com.
Ting LiuSichuan Kelun Pharmaceutical Comp. Ltd., Chengdu, 610072, China. 191202430@q.com.
Jian ZengCollege of Resources Science and Technology, Sichuan Agricultural University, Chengdu, 611130, China. doplin@gmail.com.
Yang-Er ChenBioinformatic Study Centre, College of Life Sciences, Sichuan Agricultural University, Ya'an, 625014, China. anty9826@163.com.
Ming YuanBioinformatic Study Centre, College of Life Sciences, Sichuan Agricultural University, Ya'an, 625014, China. yuanmingsicau@126.com.
Da-Wei ZhangCollege of Life Sciences, Sichuan University, Chengdu, 610064, China. yuanmiao1892@163.com.
Feng ZhuCollege of Life Sciences, Sichuan University, Chengdu, 610064, China. zhufeng1361@163.com.
Shu YuanCollege of Resources Science and Technology, Sichuan Agricultural University, Chengdu, 611130, China. roundtree318@hotmail.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundIn recent years, avian influenza viruses (AIVs) have seriously threatened human health. Questions such as: why do AIVs infect humans?, how quickly can an AIV become pandemic?, and which virus is the most dangerous? cannot be sufficiently answered using current bioinformatic studies.

methodSecondary structures and energies of representative 5'-untranslated region (UTR) of the HA gene were calculated. Then their secondary structures and energies were re-calculated after one or two nucleotide substitutions were introduced into the HA 5'-UTR. Phylogenetic trees on the basis of hemagglutinin (HA) and polymerase basic protein 2 (PB2) amino acid sequences and HA 5'-UTR nucleotide sequences were constructed. The connection between the energy and translation efficiency of 5'-UTR was confirmed by in vitro coupled transcription/translation assay.

resultsThe simplicity of the secondary structure of the 5'-UTR of the HA gene determines the overall virus replication rate and transmission potential. Point mutation assays show that the 5'-UTR sequences of the HA gene in the influenza subtypes H2N2, H3N2, and H7N9 have greater variation potentials than other virus subtypes.

conclusionSome high-virulent strains of avian influenza might emerge in the next two to three years. The H2N2 subtype, once disappeared in humans, may stage a comeback. The current outbreak of H7N9 may become pandemic and cause even more deaths, if one or two bases are substituted in the 5'-UTR sequence of the HA gene.

Indexed as

Pandemics5' Untranslated RegionsAmino Acid SequenceAnimalsComputational BiologyHemagglutinin Glycoproteins, Influenza VirusHumansInfluenza A virusInfluenza, HumanMolecular Sequence DataMutationNucleic Acid ConformationPhylogenyRNA-Dependent RNA PolymeraseRNA, MessengerRNA, Viral5' Untranslated RegionsHemagglutinin Glycoproteins, Influenza VirusPB2 protein, Influenzavirus ARNA-Dependent RNA PolymeraseRNA, MessengerRNA, ViralViral Proteins

Identifiers

PMID26612517
PMCPMC4661964

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.