Evidence map›Paper›PMID 26612492›Full record

ReviewGenome biology2015

Resources for the design of CRISPR gene editing experiments.

Daniel B Graham, David E Root

Abstract readReview
In one paragraph

Review in Genome biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed.

  1. Current Techniques of Gene Editing in Pigs for Xenotransplantation.Transplant international : official journal of the European Society for Organ Transplantation · 2025
    Review
  2. Article
  3. Review
  4. Review
  5. Review
  6. Review
  7. Article
  8. Review
  9. Article
  10. CRISPR Screen Contributes to Novel Target Discovery in Prostate Cancer.International journal of molecular sciences · 2021
    Review
  11. TALENs-an indispensable tool in the era of CRISPR: a mini review.Journal, genetic engineering & biotechnology · 2021
    Review
  12. Gene Editing in Dimorphic Fungi Using CRISPR/Cas9.Current protocols in microbiology · 2020
    Article
  13. Article
  14. Review
  15. Recent Advances in Genetic Tools forFrontiers in genetics · 2020
    Review
  16. Review
  17. Computational approaches for effective CRISPR guide RNA design and evaluation.Computational and structural biotechnology journal · 2020
    Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Daniel B GrahamBroad Institute of MIT and Harvard, Cambridge, MA, 02142, USA.
David E RootBroad Institute of MIT and Harvard, Cambridge, MA, 02142, USA. droot@broadinstitute.org.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

CRISPR-based approaches have quickly become a favored method to perturb genes to uncover their functions. Here, we review the key considerations in the design of genome editing experiments, and survey the tools and resources currently available to assist users of this technology.

Indexed as

Bacterial ProteinsCRISPR-Associated Protein 9CRISPR-Cas SystemsEndonucleasesEscherichia coliGene Expression RegulationGene TargetingRNA EditingRNA, Guide, CRISPR-Cas SystemsBacterial ProteinsCas9 endonuclease Streptococcus pyogenesCRISPR-Associated Protein 9EndonucleasesRNA, Guide, CRISPR-Cas Systems

Identifiers

PMID26612492
PMCPMC4661947

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.