Evidence map›Paper›PMID 26611758›Full record

ArticleAnnals of clinical microbiology and antimicrobials2015

Purification and characterization of a new β-lactamase OXA-205 from Pseudomonas aeruginosa.

R Krasauskas, D Labeikytė, A Markuckas, J Povilonis, J Armalytė, R Plančiūnienė, P Kavaliauskas, E Sužiedėlienė

Open access · goldAbstract read
In one paragraph

Article in Annals of clinical microbiology and antimicrobials, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 1 pooled it
0.1field-weighted citation impact, top 60% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 1 synthesis or guideline pooled it, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

R KrasauskasDepartment of Biochemistry and Molecular Biology, Faculty of Natural Sciences, Vilnius University, M. K. Čiurlionio 21/27, 03101, Vilnius, Lithuania. renatas.krasauskas@gf.vu.lt.
D LabeikytėDepartment of Biochemistry and Molecular Biology, Faculty of Natural Sciences, Vilnius University, M. K. Čiurlionio 21/27, 03101, Vilnius, Lithuania. danute.labeikyte@gf.vu.lt.
A MarkuckasDepartment of Biochemistry and Molecular Biology, Faculty of Natural Sciences, Vilnius University, M. K. Čiurlionio 21/27, 03101, Vilnius, Lithuania. arvydas.markuckas@gf.vu.lt.
J PovilonisDepartment of Biochemistry and Molecular Biology, Faculty of Natural Sciences, Vilnius University, M. K. Čiurlionio 21/27, 03101, Vilnius, Lithuania. justas.povilonis@gmail.com.
J ArmalytėDepartment of Biochemistry and Molecular Biology, Faculty of Natural Sciences, Vilnius University, M. K. Čiurlionio 21/27, 03101, Vilnius, Lithuania. julija.armalyte@gf.vu.lt.
R PlančiūnienėInstitute of Microbiology and Virology, Lithuanian University of Health Sciences, Tilžės 18, 47181, Kaunas, Lithuania. ritaplanc@mail.lt.
P KavaliauskasDepartment of Biochemistry and Molecular Biology, Faculty of Natural Sciences, Vilnius University, M. K. Čiurlionio 21/27, 03101, Vilnius, Lithuania. kavaliauskaspov@gmail.com.
E SužiedėlienėDepartment of Biochemistry and Molecular Biology, Faculty of Natural Sciences, Vilnius University, M. K. Čiurlionio 21/27, 03101, Vilnius, Lithuania. edita.suziedeliene@gf.vu.lt.
Vilnius University · LTLithuanian University of Health Sciences · LT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundWe have identified a novel class 1 integron (1503 bp), named In671 in a clinical Pseudomonas aeruginosa isolate. Integron sequence analysis revealed two gene cassettes, one coding for a new OXA-type β-lactamase designated as OXA-205 and the other coding for the aadB gene that is responsible for aminoglycoside resistance. The 266 amino acid sequence of OXA-205 revealed that this β-lactamase belongs to the Ambler class D showing highest sequence homology to the OXA-2 sub-lineage. Our objective was to purify and characterize β-lactamase OXA-205.

methodsEscherichia coli cells were transformed with a plasmid containing cloned bla OXA-205 gene from P. aeruginosa. Purification of overproduced OXA-205 consisted of a single ion-exchange chromatography step. SDS-PAGE and isoelectric focusing were performed to determine the molecular mass and pI, respectively. Size-exclusion chromatography was undertaken to determine the OXA-205 oligomerization state. Substrate hydrolysis reactions were employed to assess enzyme kinetic parameters.

resultsPurification of OXA-205 yielded the enzyme with >95 % purity (as verified by SDS-PAGE). Approximate yield of the protein was estimated to be 20 mg per liter of culture. OXA-205 had a pI at 8.1, molecular mass of 26 kDa and a monomeric native structure. Kinetic analysis revealed that OXA-205 hydrolyzed narrow spectrum substrates, including ampicillin, carbenicillin, oxacillin, penicillin G, cefazolin and cefuroxime. Additionally, we observed a substrate inhibition profile towards carbenicillin and oxacillin, but not with ampicillin or penicillin G. Our results also show that OXA-205 conferred unusually high (among class D β-lactamases) resistance towards inhibition by NaCl.

conclusionsOXA-205 can be considered a narrow spectrum monomeric β-lactamase that demonstrates unusually high resistance profile towards inhibition by NaCl.

Indexed as

Amino Acid Sequencebeta-Lactamasesbeta-LactamsChromatography, GelChromatography, Ion ExchangeCloning, MolecularElectrophoresis, Polyacrylamide GelEscherichia coliGene ExpressionHumansHydrolysisIntegronsIsoelectric FocusingIsoelectric PointKineticsModels, Molecularbeta-Lactamasesbeta-Lactams

Identifiers

PMID26611758
PMCPMC4661998
OpenAlexW2175253508

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.