Evidence map›Paper›PMID 26610891›Full record

ArticleGlycobiology2016

Functional analysis of N-linking oligosaccharyl transferase enzymes encoded by deep-sea vent proteobacteria.

Dominic C Mills, Adrian J Jervis, Sherif Abouelhadid, Laura E Yates, Jon Cuccui, Dennis Linton, Brendan W Wren

Open access · bronzeAbstract read
In one paragraph

Article in Glycobiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 31 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Bacterial Glycoengineering as a Biosynthetic Route to Customized Glycomolecules.Advances in biochemical engineering/biotechnology · 2021
    Article
  7. Article
  8. Review
  9. Influence of Protein Glycosylation onFrontiers in microbiology · 2020
    Article
  10. Review
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Dominic C MillsDepartment of Infectious and Tropical Diseases, London School of Hygiene and Tropical Medicine, University of London, Keppel Street, London WC1E 7HT, UK.
Adrian J JervisFaculty of Life Sciences, University of Manchester, Michael Smith Building, Manchester M13 9PT, UK.
Sherif AbouelhadidDepartment of Infectious and Tropical Diseases, London School of Hygiene and Tropical Medicine, University of London, Keppel Street, London WC1E 7HT, UK.
Laura E YatesDepartment of Infectious and Tropical Diseases, London School of Hygiene and Tropical Medicine, University of London, Keppel Street, London WC1E 7HT, UK.
Jon CuccuiDepartment of Infectious and Tropical Diseases, London School of Hygiene and Tropical Medicine, University of London, Keppel Street, London WC1E 7HT, UK.
Dennis LintonFaculty of Life Sciences, University of Manchester, Michael Smith Building, Manchester M13 9PT, UK.
Brendan W WrenDepartment of Infectious and Tropical Diseases, London School of Hygiene and Tropical Medicine, University of London, Keppel Street, London WC1E 7HT, UK brendan.wren@lshtm.ac.uk.
University of London · GBUniversity of Manchester · GBLondon School of Hygiene & Tropical Medicine · GB

Funding

Biotechnology and Biological Sciences Research Council BB/F009321/1Biotechnology and Biological Sciences Research Council BB/H017437/1Biotechnology and Biological Sciences Research Council BB/H017542/1Biotechnology and Biological Sciences Research Council E20372Wellcome Trust 102978/Z/13/ZWellcome Trust 102979Wellcome Trust 102979/Z/13/Z
6 · The paper itself

Abstract

Bacterial N-linking oligosaccharyl transferases (OTase enzymes) transfer lipid-linked glycans to selected proteins in the periplasm and were first described in the intestinal pathogen Campylobacter jejuni, a member of the ε-proteobacteria-subdivision of bacteria. More recently, orthologues from other ε-proteobacterial Campylobacter and Helicobacter species and a δ-proteobacterium, Desulfovibrio desulfuricans, have been described, suggesting that these two subdivisions of bacteria may be a source of further N-linked protein glycosylation systems. Whole-genome sequencing of both ε- and δ-proteobacteria from deep-sea vent habitats, a rich source of species from these subdivisions, revealed putative ORFs encoding OTase enzymes and associated adjacent glycosyltransferases similar to the C. jejuni N-linked glycosylation locus. We expressed putative OTase ORFs from the deep-sea vent species Nitratiruptor tergarcus, Sulfurovum lithotrophicum and Deferribacter desulfuricans in Escherichia coli and showed that they were able to functionally complement the C. jejuni OTase, CjPglB. The enzymes were shown to possess relaxed glycan specificity, transferring diverse glycan structures and demonstrated different glycosylation sequon specificities. Additionally, a permissive D. desulfuricans acceptor protein was identified, and we provide evidence that the N-linked glycan synthesized by N. tergarcus and S. lithotrophicum contains an acetylated sugar at the reducing end. This work demonstrates that deep-sea vent bacteria encode functional N-glycosylation machineries and are a potential source of biotechnologically important OTase enzymes.

Indexed as

Escherichia coliGenome, BacterialGlycosylationHexosyltransferasesMembrane ProteinsOceans and SeasPolysaccharidesProteobacteriaSubstrate Specificitydolichyl-diphosphooligosaccharide - protein glycotransferaseHexosyltransferasesMembrane ProteinsPolysaccharidesbacterial glycobiologydeep-sea vent bacteriaglycoengineeringN-linked glycosylation

Identifiers

PMID26610891
PMCPMC4767053
OpenAlexW2304862294

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.