Evidence map›Paper›PMID 26610459›Full record

ArticleMolecules (Basel, Switzerland)2015

Clones of FeSOD, MDHAR, DHAR Genes from White Clover and Gene Expression Analysis of ROS-Scavenging Enzymes during Abiotic Stress and Hormone Treatments.

Yan Zhang, Zhou Li, Yan Peng, Xiaojuan Wang, Dandan Peng, Yaping Li, Xiaoshuang He, Xinquan Zhang, Xiao Ma, Linkai Huang and 1 more

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 66 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Yan ZhangCollege of Animal Science and Technology, Sichuan Agricultural University, Chengdu 611130, China. zhangyan1111zy@126.com.
Zhou LiCollege of Animal Science and Technology, Sichuan Agricultural University, Chengdu 611130, China. lizhou1986814@163.com.
Yan PengCollege of Animal Science and Technology, Sichuan Agricultural University, Chengdu 611130, China. pengyanlee@163.com.
Xiaojuan WangCollege of Animal Science and Technology, Sichuan Agricultural University, Chengdu 611130, China. wangxiaoj12@126.com.
Dandan PengCollege of Animal Science and Technology, Sichuan Agricultural University, Chengdu 611130, China. Diana-Peng@hotmail.com.
Yaping LiCollege of Animal Science and Technology, Sichuan Agricultural University, Chengdu 611130, China. 18349237779@163.com.
Xiaoshuang HeCollege of Animal Science and Technology, Sichuan Agricultural University, Chengdu 611130, China. 18728153879@163.com.
Xinquan ZhangCollege of Animal Science and Technology, Sichuan Agricultural University, Chengdu 611130, China. zhangxq@sicau.edu.cn.
Xiao MaCollege of Animal Science and Technology, Sichuan Agricultural University, Chengdu 611130, China. maroar@126.com.
Linkai HuangCollege of Animal Science and Technology, Sichuan Agricultural University, Chengdu 611130, China. huanglinkai@sicau.edu.cn.
Yanhong YanCollege of Animal Science and Technology, Sichuan Agricultural University, Chengdu 611130, China. yanyanhong3588284@126.com.
Sichuan Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Increased transcriptional levels of genes encoding antioxidant enzymes play important protective roles in coping with excessive accumulation of reactive oxygen species (ROS) in plants exposed to various abiotic stresses. To fully elucidate different evolutions and functions of ROS-scavenging enzymatic genes, we isolated iron superoxide dismutase (FeSOD), dehydroascorbate reductase (DHAR) and monodehydroascorbate reductase (MDHAR) from white clover for the first time and subsequently tested dynamic expression profiles of these genes together with previously identified other antioxidant enzyme genes including copper zinc superoxide dismutase (Cu/ZnSOD), manganese superoxide dismutase (MnSOD), glutathione reductase (GR), peroxidase (POD), catalase (CAT), and ascorbate peroxidase (APX) in response to cold, drought, salinity, cadmium stress and exogenous abscisic acid (ABA) or spermidine (Spd) treatment. The cloned fragments of FeSOD, DHAR and MDHAR genes were 630, 471 and 669 bp nucleotide sequences encoding 210, 157 and 223 amino acids, respectively. Phylogenetic analysis indicated that both amino acid and nucleotide sequences of these three genes are highly conservative. In addition, the analysis of genes expression showed the transcription of GR, POD, MDHAR, DHAR and Cu/ZnSOD were rapidly activated with relatively high abundance during cold stress. Differently, CAT, APX, FeSOD, Cu/ZnSOD and MnSOD exhibited more abundant transcripts compared to others under drought stress. Under salt stress, CAT was induced preferentially (3-12 h) compared to GR which was induced later (12-72 h). Cadmium stress mainly up-regulated Cu/ZnSOD, DHAR and MDHAR. Interestingly, most of genes expression induced by ABA or Spd happened prior to various abiotic stresses. The particular expression patterns and different response time of these genes indicated that white clover differentially activates genes encoding antioxidant enzymes to mitigate the damage of ROS during various environmental stresses.

Indexed as

Oxidative StressCloning, MolecularFabaceaeGene ExpressionGene Expression Regulation, EnzymologicGene Expression Regulation, PlantGlutathione TransferaseNADH, NADPH OxidoreductasesPhylogenyPlant Growth RegulatorsReactive Oxygen SpeciesSuperoxide DismutaseGlutathione TransferaseNADH, NADPH OxidoreductasesPlant Growth RegulatorsReactive Oxygen SpeciesSuperoxide Dismutaseabiotic stressexpression analysisROS-scavengingwhite clover (Trifolium repens L.)

Identifiers

PMID26610459
PMCPMC6332117
OpenAlexW2181212629

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.