Evidence map›Paper›PMID 26609676›Full record

ArticleProtein science : a publication of the Protein Society2016

Redox-dependent disulfide bond formation in SAP30L corepressor protein: Implications for structure and function.

Mikko Laitaoja, Helena Tossavainen, Tero Pihlajamaa, Jarkko Valjakka, Keijo Viiri, Olli Lohi, Perttu Permi, Janne Jänis

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 1 country.

Mikko LaitaojaDepartment of Chemistry, University of Eastern Finland, Joensuu, Finland.
Helena TossavainenInstitute of Biotechnology, University of Helsinki, Helsinki, Finland.
Tero PihlajamaaInstitute of Biotechnology, University of Helsinki, Helsinki, Finland.
Jarkko ValjakkaBioMediTech, University of Tampere, Tampere, Finland.
Keijo ViiriCenter for Child Health Research and Tampere University Hospital, University of Tampere, Tampere, Finland.
Olli LohiCenter for Child Health Research and Tampere University Hospital, University of Tampere, Tampere, Finland.
Perttu PermiInstitute of Biotechnology, University of Helsinki, Helsinki, Finland.
Janne JänisDepartment of Chemistry, University of Eastern Finland, Joensuu, Finland.
University of Helsinki · FIUniversity of Eastern Finland · FITampere University · FITampere University · FITampere University Hospital · FI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sin3A-associated protein 30-like (SAP30L) is one of the key proteins in a multi-subunit protein complex involved in transcriptional regulation via histone deacetylation. SAP30L, together with a highly homologous SAP30 as well as other SAP proteins (i.e., SAP25, SAP45, SAP130, and SAP180), is an essential component of the Sin3A corepressor complex, although its actual role has remained elusive. SAP30L is thought to function as an important stabilizing and bridging molecule in the complex and to mediate its interactions with other corepressors. SAP30L has been previously shown to contain an N-terminal Cys3 His type zinc finger (ZnF) motif, which is responsible for the key protein-protein, protein-DNA, and protein-lipid interactions. By using high-resolution mass spectrometry, we studied a redox-dependent disulfide bond formation in SAP30L ZnF as a regulatory mechanism for its structure and function. We showed that upon oxidative stress SAP30L undergoes the formation of two specific disulfide bonds, a vicinal Cys29-Cys30 and Cys38-Cys74, with a concomitant release of the coordinated zinc ion. The oxidized protein was shown to remain folded in solution and to bind signaling phospholipids. We also determined a solution NMR structure for SAP30L ZnF that showed an overall fold similar to that of SAP30, determined earlier. The NMR titration experiments with lipids and DNA showed that the binding is mediated by the C-terminal tail as well as both α-helices of SAP30L ZnF. The implications of these results for the structure and function of SAP30L are discussed.

Indexed as

Amino Acid SequenceCo-Repressor ProteinsDisulfidesDNAHumansModels, MolecularNuclear Magnetic Resonance, BiomolecularNuclear ProteinsOxidation-ReductionOxidative StressPhospholipidsProtein BindingProtein ConformationProtein FoldingZincZinc FingersCo-Repressor ProteinsDisulfidesDNANuclear ProteinsPhospholipidsSAP30L protein, humanZincdisulfideFourier transform ion cyclotron resonancemass spectrometryNMRredox regulationSAP30LSin3A-associated proteinzinc finger

Identifiers

PMID26609676
PMCPMC4815409
OpenAlexW2176892357

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.