Evidence map›Paper›PMID 26607987›Full record

ArticleJournal of clinical microbiology2016

Epidemiologic and Genotypic Review of Carbapenemase-Producing Organisms in British Columbia, Canada, between 2008 and 2014.

Inna Sekirov, Matthew A Croxen, Corrinne Ng, Robert Azana, Yin Chang, Laura Mataseje, David Boyd, Chand Mangat, Benjamin Mack, Manal Tadros and 6 more

Open access · bronzeAbstract readHistorical Article
In one paragraph

Article in Journal of clinical microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.8field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Travel-Related Antimicrobial Resistance: A Systematic Review.Tropical medicine and infectious disease · 2021
    Review
  5. Article
  6. Article
  7. Antimicrobial use in animals.The Canadian veterinary journal = La revue veterinaire canadienne · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 8 institutions in 1 country.

Inna SekirovBritish Columbia Center for Disease Control Public Health Laboratory, Provincial Health Services Authority, Vancouver, British Columbia, Canada Department of Pathology and Laboratory Medicine, The University of British Columbia, Vancouver, British Columbia, Canada.
Matthew A CroxenBritish Columbia Center for Disease Control Public Health Laboratory, Provincial Health Services Authority, Vancouver, British Columbia, Canada.
Corrinne NgBritish Columbia Center for Disease Control Public Health Laboratory, Provincial Health Services Authority, Vancouver, British Columbia, Canada.
Robert AzanaBritish Columbia Center for Disease Control Public Health Laboratory, Provincial Health Services Authority, Vancouver, British Columbia, Canada.
Yin ChangBritish Columbia Center for Disease Control Public Health Laboratory, Provincial Health Services Authority, Vancouver, British Columbia, Canada.
Laura MatasejePublic Health Agency of Canada, Winnipeg, Manitoba, Canada.
David BoydPublic Health Agency of Canada, Winnipeg, Manitoba, Canada.
Chand MangatPublic Health Agency of Canada, Winnipeg, Manitoba, Canada.
Benjamin MackDepartment of Pathology and Laboratory Medicine, The University of British Columbia, Vancouver, British Columbia, Canada Surrey Memorial Hospital, Fraser Health Authority, Surrey, British Columbia, Canada.
Manal TadrosDepartment of Pathology and Laboratory Medicine, The University of British Columbia, Vancouver, British Columbia, Canada Surrey Memorial Hospital, Fraser Health Authority, Surrey, British Columbia, Canada.
Elizabeth BrodkinDepartment of Pathology and Laboratory Medicine, The University of British Columbia, Vancouver, British Columbia, Canada Surrey Memorial Hospital, Fraser Health Authority, Surrey, British Columbia, Canada.
Pamela KibseyDepartment of Pathology and Laboratory Medicine, The University of British Columbia, Vancouver, British Columbia, Canada Royal Jubilee Hospital, Vancouver Island Health Authority, Victoria, British Columbia, Canada.
Aleksandra StefanovicDepartment of Pathology and Laboratory Medicine, The University of British Columbia, Vancouver, British Columbia, Canada Vancouver General Hospital, Vancouver Coastal Health, Vancouver, British Columbia, Canada.
Sylvie ChampagneDepartment of Pathology and Laboratory Medicine, The University of British Columbia, Vancouver, British Columbia, Canada St. Paul's Hospital, Providence Health Care, Vancouver, British Columbia, Canada.
Michael R MulveyPublic Health Agency of Canada, Winnipeg, Manitoba, Canada.
Linda M N HoangBritish Columbia Center for Disease Control Public Health Laboratory, Provincial Health Services Authority, Vancouver, British Columbia, Canada Department of Pathology and Laboratory Medicine, The University of British Columbia, Vancouver, British Columbia, Canada linda.hoang@bccdc.ca.
Provincial Health Services Authority · CAPublic Health Agency of Canada · CAUniversity of British Columbia · CAFraser Health · CAIsland Health · CASt. Paul's Hospital · CASurrey Memorial Hospital · CAVancouver Coastal Health · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Carbapenemase-producing organisms (CPOs) are a serious emerging problem for health care facilities worldwide. Owing to their resistance to most antimicrobial therapies, CPOs are difficult to treat and pose a challenge for infection prevention and control. Since 2010, lab-based surveillance for CPOs and PCR-based testing were implemented in British Columbia (BC), Canada. A review of CPOs in BC from 2008 to March 2014 was done to characterize the resistance mechanisms and possible clonal strain transmission and to compare pulsed-field gel electrophoresis (PFGE), multilocus sequence typing (MLST), and plasmid restriction fragment length polymorphism (RFLP) as molecular typing tools. During this study period, a total of 177 CPO cases were identified. Patient demographics and travel history were reviewed, and a descriptive analysis was carried out. PFGE profiles, MLST, and plasmid RFLP analysis for a subset of Escherichia coli, Klebsiella pneumoniae, and Enterobacter species isolates were obtained and analyzed. Our findings demonstrate that CPOs have been increasing in number in BC over time, from 1 isolate/year retrospectively identified in 2008 and 2009 to 82 isolates in 2013 and 30 isolates in the first quarter of 2014. Overall, K. pneumoniae isolates lack clonality, although some seemingly related clusters have been found. Plasmid analysis showed evidence of the spread of plasmids carrying carbapenemase-encoding genes between the examined isolates. Analysis of Enterobacter cloacae isolates revealed a more clonal nature of these CPOs in BC. The presence of related clusters provides evidence of interpatient organism transmission both within and between institutions. Although in our study, NDM-harboring E. cloacae isolates appeared to spread clonally, the spread of carbapenem resistance in K. pneumoniae seems to be plasmid mediated.

Indexed as

GenotypeBacteriaBacterial InfectionsBacterial Proteinsbeta-LactamasesBritish ColumbiaCluster AnalysisElectrophoresis, Gel, Pulsed-FieldEscherichia coliHistory, 21st CenturyHumansKlebsiella pneumoniaeMultilocus Sequence TypingBacterial Proteinsbeta-Lactamasescarbapenemase

Identifiers

PMID26607987
PMCPMC4733174
OpenAlexW2176543502

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.