Evidence map›Paper›PMID 26605638›Full record

ArticleAnalytical chemistry2016

Nanoparticle-Assisted Removal of Protein in Human Serum for Metabolomics Studies.

Bo Zhang, Mouzhe Xie, Lei Bruschweiler-Li, Rafael Brüschweiler

Abstract read
In one paragraph

Article in Analytical chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Practical Aspects of NMR-Based Metabolomics.Handbook of experimental pharmacology · 2023
    Article
  6. Quantitative plasma profiling byFrontiers in molecular biosciences · 2023
    Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. Review
  12. Review
  13. Review
  14. The future of NMR-based metabolomics.Current opinion in biotechnology · 2017
    Review
  15. Recent Advances in NMR-Based Metabolomics.Analytical chemistry · 2017
    Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Bo ZhangDepartment of Chemistry and Biochemistry, ‡Campus Chemical Instrument Center, and §Department of Biological Chemistry and Pharmacology, The Ohio State University , Columbus, Ohio 43210, United States.
Mouzhe XieDepartment of Chemistry and Biochemistry, ‡Campus Chemical Instrument Center, and §Department of Biological Chemistry and Pharmacology, The Ohio State University , Columbus, Ohio 43210, United States.
Lei Bruschweiler-LiDepartment of Chemistry and Biochemistry, ‡Campus Chemical Instrument Center, and §Department of Biological Chemistry and Pharmacology, The Ohio State University , Columbus, Ohio 43210, United States.
Rafael BrüschweilerDepartment of Chemistry and Biochemistry, ‡Campus Chemical Instrument Center, and §Department of Biological Chemistry and Pharmacology, The Ohio State University , Columbus, Ohio 43210, United States.

Funding

Southeast Resource Center for Integrated Metabolomics (SECIM)U24DK097209 · NIDDK · UNIVERSITY OF FLORIDA · PI EDISON, ARTHUR S, YOST, RICHARD A. · 2013 to 2017
$9.2M
New hybrid methods for the improved and integrated analysis of complex metabolomics mixturesR01GM066041 · NIGMS · OHIO STATE UNIVERSITY · PI BRUSCHWEILER, RAFAEL · 2002 to 2019
$3.3M
NIDDK NIH HHS U24 DK097209NIDDK NIH HHS U24 DK097209-01A1NIGMS NIH HHS R01 GM 066041NIGMS NIH HHS R01 GM066041
6 · The paper itself

Abstract

Among human body fluids, serum plays a key role for diagnostic tests and, increasingly, for metabolomics analysis. However, the high protein content of serum poses significant challenges for nuclear magnetic resonance (NMR)-based metabolomics studies because it can strongly interfere with metabolite signal detection and quantitation. Although several methods for protein removal have been proposed, including ultrafiltration and organic-solvent-induced protein precipitation, there is currently no standard operating procedure for the elimination of protein from human serum samples. Here, we introduce novel procedures for the removal of protein from serum by the addition of nanoparticles. It is demonstrated how serum protein can be efficiently, cost-effectively, and environmentally friendly removed at physiological pH (pH 7.4) through attractive interactions with silica nanoparticles. It is further shown how serum can be processed with nanoparticles prior to ultrafiltration or organic-solvent-induced protein precipitation for optimal protein removal. After examination of all of the procedures, the combination of nanoparticle treatment and ultrafiltration is found to have a minimal effect on the metabolite content, leading to remarkably clean homo- and heteronuclear NMR spectra of the serum metabolome that compare favorably to other methods for protein removal.

Indexed as

MetabolomicsBlood ProteinsHumansNanoparticlesNuclear Magnetic Resonance, BiomolecularBlood Proteins

Identifiers

PMID26605638
PMCPMC5358798

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.